Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01891 ATGATTCCAGCTGTAGTGGGAAATAGCTTCATAGCCAAGGGAATCACTATTGAGAATGGAGCAGGTCCTAGCAAACACCAGGCAGTGGCGTTAAGGAGTGGTTCAGACTTCTCGGCATTTTATCAATGCAGCTTTGTTGGATACCAAGACACACTCTATACTCATACCTTACGACAATTCTACAGGGAATGTGACATATATGGCACCATTGACTTCATTTTTGGTAACGCAGCTGTGGTTTTCCAAATGAGCAATCTATATGCTCGGCTACCATTGCAGAACCAGAAGAACATATTTACTGCACAAGGTAGAGAGGACCCTAATCAAAACACAGGCATCTCCATCTTGAATTGCAAAGTAACTGCTGCATCTGATTTCATCGTGAACAAGACATCGTTTCAGACATACTTAGGGCGCCCATGGAAGGAGTATTCGAGGACTGTGTATCTCAAGAGTTTCATTGATGATTTGGTAGACCCTGCAGGTTGGTTGGAATGGAACGGGACTTTTGCACTGAGTACGTTATATTATGGTGAGTATCTGAATAGGGGGCCGGGGTCAAATACAAGCGCTAGAGTCAACTGGCCTGGCTATAGGGTCATCACAAATGCTAGTGAGGCAAGCCAATTTACAGTTGGGCCATTTATACAAGGGAATGATTGGTTGAACTCAACTGGCATCCCCTTCTATTCTGGTCTGAGTTAG 705 0.4426 MIPAVVGNSFIAKGITIENGAGPSKHQAVALRSGSDFSAFYQCSFVGYQDTLYTHTLRQFYRECDIYGTIDFIFGNAAVVFQMSNLYARLPLQNQKNIFTAQGREDPNQNTGISILNCKVTAASDFIVNKTSFQTYLGRPWKEYSRTVYLKSFIDDLVDPAGWLEWNGTFALSTLYYGEYLNRGPGSNTSARVNWPGYRVITNASEASQFTVGPFIQGNDWLNSTGIPFYSGLS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01891 234 FunFam Pectinesterase 4 3 233 - -
Pte18g01891 234 PANTHER PECTINESTERASE 4 223 - -
Pte18g01891 234 SUPERFAMILY Pectin lyase-like 4 232 IPR011050 -
Pte18g01891 234 Gene3D - 3 233 IPR012334 -
Pte18g01891 234 Pfam Pectinesterase 4 219 IPR000070 GO:0030599|GO:0042545
Pte18g01891 234 ProSitePatterns Pectinesterase signature 2. 66 75 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01891 Pte-Chr18 29744182 29745185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01891 5 232 Carbohydrate Esterase AT4G02300 67.105 3.18e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01891 K01051 - fve:101313376 410.994