Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01890 ATGTCTAGCCTCAGAAAAATAGCTCAACTCTTGTTTACAATTTTGCCCACGTTTACTCTTATTCTGCTACTGTTACTTATTTCGGTTACTCGTTTGAAAAACACAAGGGATACTGAAAAATCTCCTGAGGTACATTTGCATATCCAGAAGCACATTCAAGTTGCTCATTCTGCGTGTGAAGGGACACTCTACCCTGACCTTTGCGTTTCAACTGTTGCTACTTTTCCAGATCTAGCCTCCAAATCACTCCCTCAAATCATCTGTGCTGTCGTCAACCAAACTGCCCTCGAAGTCAAACTAACGTCCTTCAACTGCACTGCCATTCGAAACAAGTTCAAAAAAATTCTTGGACCCCTCGAGAAGACAGCTCTTGATGACTGTCTCGAACTGTTTACCGACACAATTGCCGAGCTGAAGAAAACCGTATCTGATCTCTCGAAGAACACTCATTCACCTGCTAAATACTACAATGACTTGCGGACCTTGTTAAGTGCGGCAATGACCAACCAACAGACATGCCTAGATGGCTTTGCGTACAGCAAAACCAAAGTGAGAAAGAGGATTGAGAAGAACCTCTTCAAAATTTCACGTCATGTGAGTAACTCTCTCGCCATGCTTAAAAAAATCCCAGGTGTCCATGCGTCCAAACACGAAGTTTTACCAGAGTATGGGGCAATTGAAGACGATGGATTTCCGTCCTGGATATCAATCAAGGATCGAAAATTGTTACAAGCTCCTGTGAATCAGACTCAAGTTAATCTAGTGGTGGCTAAAGATGGAACTGGGAATTTCACTACCGTTGGAGACGCAGTGGCAGCAGCTCCAAACTCGAGCACAACCAGGTATGTACATTCATGTCTCAATGAAACCACCACCTGA 879 0.4357 MSSLRKIAQLLFTILPTFTLILLLLLISVTRLKNTRDTEKSPEVHLHIQKHIQVAHSACEGTLYPDLCVSTVATFPDLASKSLPQIICAVVNQTALEVKLTSFNCTAIRNKFKKILGPLEKTALDDCLELFTDTIAELKKTVSDLSKNTHSPAKYYNDLRTLLSAAMTNQQTCLDGFAYSKTKVRKRIEKNLFKISRHVSNSLAMLKKIPGVHASKHEVLPEYGAIEDDGFPSWISIKDRKLLQAPVNQTQVNLVVAKDGTGNFTTVGDAVAAAPNSSTTRYVHSCLNETTT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01890 292 Gene3D - 228 284 IPR012334 -
Pte18g01890 292 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 210 IPR035513 -
Pte18g01890 292 Pfam Plant invertase/pectin methylesterase inhibitor 56 205 IPR006501 GO:0004857
Pte18g01890 292 SUPERFAMILY Pectin lyase-like 251 283 IPR011050 -
Pte18g01890 292 CDD PMEI-like_3 57 211 - -
Pte18g01890 292 PANTHER PECTINESTERASE 27 283 - -
Pte18g01890 292 Coils Coil 128 148 - -
Pte18g01890 292 SMART PMEI_2 50 205 IPR006501 GO:0004857
Pte18g01890 292 FunFam Pectinesterase 51 210 - -
Pte18g01890 292 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 211 IPR035513 -
Pte18g01890 292 NCBIfam pectinesterase inhibitor domain 19 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01890 Pte-Chr18 29741009 29742235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01890 79 283 Carbohydrate Esterase AT4G02320 43.779 9.03e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01890 K01051 - qsa:O6P43_007199 333.569