Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01888 ATGGCAGTTTTCTTCTTCCTTTTCATCTCCTGCCTCGTATTTGCACCCAGTCCACTAGCAGCCAGAGGCGTCGGATTGGTCCATCCTTCTGCCGACGATCAAAATGATGCCAGTGTAATAGGAGGGTCTCACCCAACACCCACTCCACTAGCAGCAAGAGGCGTCGGATTGGCTCACCCTTCTGCCGACAATCAAAATGATGTCAGTGTAATAGGAGGGTCTCACCCAAAACCCCAACTAATTCCAGCAATTGAGAAAGTTTGTCGGTTAGCCAAGGACGATAAACTCTGTGTCGGGAGCCTTCAAAAGGATCCAGATCTCGTCAAAGATGATGTAAAGAGCTTGGCATTCGAAATCATCAAGGTGGCCTTGTCCAATGCCACAGACATAAGCCAGCATGTGAAGACATTGGTGACGAACATGAAATTCAGTCCTGCGGTTCAGCAGGGCATGGTTGATTGCCAGCAACAGTTTATTGACGTTGCTGACAACCTGGATGACTGCCTAAATGCTTTATCGAATGGTAACATCAAAGATGTGGGAGAATGGCTCGTTGCTGCACTGGCTGCCGCCGATACCTGCATAGATTCCCTCCAGGGAGTTGAGCAAATACTTTTGAAGAAGACTGAAACCTTCCGCAAATTATGTGAAAATGCACTGGCCATTAACAGGGCCTTGGCCTCTAACCCCGTGTTCGCGCACTAA 705 0.4851 MAVFFFLFISCLVFAPSPLAARGVGLVHPSADDQNDASVIGGSHPTPTPLAARGVGLAHPSADNQNDVSVIGGSHPKPQLIPAIEKVCRLAKDDKLCVGSLQKDPDLVKDDVKSLAFEIIKVALSNATDISQHVKTLVTNMKFSPAVQQGMVDCQQQFIDVADNLDDCLNALSNGNIKDVGEWLVAALAAADTCIDSLQGVEQILLKKTETFRKLCENALAINRALASNPVFAH* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01888 234 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 226 IPR035513 -
Pte18g01888 234 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 228 - -
Pte18g01888 234 SMART PMEI_2 79 222 IPR006501 GO:0004857
Pte18g01888 234 NCBIfam pectinesterase inhibitor domain 84 226 IPR006501 GO:0004857
Pte18g01888 234 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 226 IPR035513 -
Pte18g01888 234 Pfam Plant invertase/pectin methylesterase inhibitor 83 222 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01888 Pte-Chr18 29723703 29724593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01888 76 229 Carbohydrate Esterase AT1G53840 23.837 1.94e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01888 - K06766 qsa:O6P43_010798 135.576