Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01877 ATGTCATCTTGGGTTACATCCCTTTCATGTTCATCCACTGTGATAAGAGCACATGATGAGCCATCTGTGTCAGTTCCGGTGCAATGGCTGAGATTTGTTTTCCTCTCTCCTTGTCCACAGAGGATTTTGTTGTTTGCAGTTGACGTTCTTTTACTGCTAGTACTTCTCGTCTCTGCTCTTCGCAAACTTTACTCTAAATTCACCTCTGGTAACCAACGCAGCTCTCCCCTTCACGCACCTCTAGTAAGAAACCACAACGTCACAGTTAGAACGACTCTCTGGTTTAGACTCACTCTGAGTGCATCTCTTCTTTTGGCGGTTTCTTATGTTCTCGCCTGCATTTTGATATTCACTAGGAGTACTCGATCGGAATGGAAGCTACTCGATGGATTGTTTTGGTTATTGCAGGCTATTACACACGTGGTGATAGCGATCCTAATCGTTAATGAGAAGAGACTCCGAGCTTTCTGTCAACCTACATTGCTTCGAGCATATTGGATTGTCAACTTCTTTGTTATTTGTTTGTTCACAGCGTCCGGGATCATTCGTAGGGTCTCTGCTCAAGAAACCCAAGAGTTCAGTTTCAGATCAGACGATGTGATATCTTTCATATCATGGCCTTTTTCCCTTGTCCTAGTCATTGTTGGAATCAAAGAATCTACAGGGATAGTAAGTGGAGAAACAGAAGTTGATACTGATGACGAAGCTAAATTGCATGAACCCCTTTTGAGCAAAACAGATGTGACTAGTTTCGCTTCAGCTTCTTTTCTTTCCCAGGCCTTCTGGCATTGGATGAATCCTTTATTGAGTAAAGGTTATCAATCTCCTCTTAAGATTGATGAAGTTCCGTACCTGTCACCAGAACACAGAGCTGAAAGAATGTCGGTGAAATTTCAACAGTGCTGGCCAAAACCTCATGTAAGAACAGAGCACCCTGTTCGGTACGCGCTTTTACGATGTTTCTGGAAGGAAATAGCTTTCACCGCCTTCCTTGCCGTGGTACGCCTTTCTGTCATGTTTGTAGGGCCGGTTTTGATTCAAAACTTCGTTGATTTCGCAGCTGGGAAAAGAAGTTCTCCATATGAAGGGTACTACCTCGTGCTGATTCTTCTAGTTGCCAAGTTTGTAGAAGTTTTGGCGATGCATCATTTCAACTTCAACTCTCAGAAACTTGGAATGCTTATAAGGTCTACCATCATCAGTTCGCTGTACAAGAAGGGTTTGAAGCTATCATGCTCTTCTCGACAGGATCATGGAGTGGGACAAATAGTGAATTACATGGCCGTCGATGCTCAACAGCTTTCTGATATGATTCTTCAGCTACATGCGCTATGGATGATGCCGGTTCAATTGGCAATAGCTTTGATGCTGCTTTACAACTGTCTAGGTGCATCGGCTGTCACAGCAATGCTTGGAATCGCCGGTGTCATTGTATTTTCAGTGTATGGAACCCATACAAACAACCGCTATATGTTTAATGTGATGATTAATCGTGATTCAAGAATGAAAGCTATAAACGAAATGCTCAGTTATATGAGGGTGATCAAGTTCCAGGCTTGGGAGGAGAAATTCAATGACAGAATTTTAGCTTTTCGCCAATCAGAGTTTGAATGGCTAACAAAGTTCATGTACTCCATTGGAGGCAATGTTGTGGTGATGTGGATGACGCCTGTGTTTATATCAACTCTTACATTTGCTACTGCCGTCTTATTAGGAGTTCCTCTCGATGCTGGAACAGTTTTCACCACAACGTCCATCTTTAGAATCGTGCAGGAACCTATAAGGACATTTCCGCAGTCTATGATCTCGCTTTCACAAGCAATGATATCACTTGGCAGGTTAGATAATTACATGCTGAGTAAGGAATTGGCGGATTCTACAGTTGAAAGAACGGAGGGATGTGATGGAGATATTGCTGTACAGGTCAATGATGCAGTCTTCAGCTGGGAGGATGACAGTGAAGAGGTGGTTTTGGAAAACATCAATTTGGAGATTAGAAAAGGGGAGCTCACAGCTATTGTTGGGACTGTGGGTTCTGGAAAATCTTCTCTTCTTGCATCCATTCTCGGAGAAATGCACAAACTTGCAGGAAAGGTTCGAGTTTGTGGCAGCACTGCATTTGTGGCTCAAACATCATGGATTCAAAATGGAACTATTCAAGAGAACATCTTGTTTGGTTTGTCAATGGACACTGAGAAGTATAGGGAAGTTATCAGAGTTTGTTGCTTAGATAAGGACCTGGAAATGATGGACTATGGAGATCAAACCGAGATTGGAGAGCGCGGTATCAATCTCAGTGGCGGACAGAAGCAGAGGATACAATTAGCACGAGCTGTATATCAAGACTGTGATACTTATCTCCTTGACGATATCTTCAGTGCAGTTGATGCTCACACTGGTACTGAAATATTCAAGGAATGTCTGAGGGGAGCTCTGAAAAACAAGACCATTTTGCTTGTAACACATCAGGTTGATTTTTTGCATAACGTTGACCTGATCTTGGTCATGAGGGATGGAATGATAGTGCAATCAGGAAAGTACGATTATCTTTTAGACTCGGGGTTGGATTTCACAGCACTAGTAGCTGCACATGAAACATCTATGGAACTTGTGGAGAGGAGTGCAACCACTACAGCCGAAAATTCCCCCAGATCATCAAACCAACCAAATACTTCATCAGACAACGGGAAAGTCAATGGTGACAACGGTTCTATAAACCAAGTGAAGTCAGAAAAGGAGGGTTCCAAACTCATCAAAGAGGAGGAAAGAGAGACTGGAAAAGTGAACTTGCATGTTTACAAATTATTCTGCACTGAGGCCTATGGTTGGTGGGGTGTCATAGTAGTATTACTTCTCTCTTTGCTGTGGCAAGCTTCGACCATGGCTACTGACTATTGGCTCGCCTATGAAACCTCAGAGAAGCGTGCAATGTCTTTCAACCCTTCTGTCTTCATTTCCGTCTATGCAATTATTGCTGCCGTTTCTGCTGTTTTAGTATCCATGAGGGTGTTCGCCTTTATGATCATTGGCCTTAAGACATGTCAAATATTCTTCTCCCAAATACTCCAAAGCATCTTACATGCTCCCATGTCCTTTTTCGACACTACCCCTTCGGGAAGAATTCTAAGCAGGGCATCGACCGATCAAACGAATGTGGATATCTTCCTTCCTATCTTCATGAACATCGCCATTTCGATATACATTACTGCGCTGGGCATCTTGATAATTACATGTCAAAATGCATGGCCAACTGTGTTCCTGATAATTCCACTCATCTGGTTGAATATATGGTACAGGGGATATTACCTCACAACATCTCGCGAATTGACTCGTCTTGACTCAATTACAAAAGCACCGGTTATCCATCACTTCTCAGAAAGCATTGCCGGTGTCACGACCATCCGATCTTTCAGAAAGCAGGAGAGATTTTTTGAAGAAAATATCAAAAGACTCGATGCCAATCTGAGAATGGATTTCCACAACAATGGTGCTAATGAGTGGTTGGGTTTTCGACTCGAGCTTCTTGGAAGCCTCATCTTCTGCCTTTCTGCTTTGTTCATGATCATTCTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCCTATGGATTTACTCTGAACGGTGTGATGTTCTTTGCCACATACGTGAGTTGTTTCATTGAGAACAAGATGGTCTCTGTTGAGAGGATAAAGCAATTCACCAAGATTCCATCAGAAGCTGCATGGCATGTCAAAGACCGAGCACCACCTCCGAGTTGGCCGACTCATGGCAATGTGGATCTCAAAGACTTGCAGGTGAGATATCGTCCAAACACACCTCTGGTACTGAAGGGCATTACTCTGAGCATAAGTGGTGGTGAGAAAATTGGCGTAGTTGGTCGCACTGGGAGTGGAAAATCAACTCTGATCCAAGTACTTTTTAGACTGGTGGAACCTTCAGGGGGCACGATCATAATTGATGGCATTGACATATCCTTTCTAGGCCTACATGAACTTAGATCGCGCTTAGGCATTATTCCTCAGGAGCCTGTTTTATTTGAAGGAACAGTAAGAAGCAACGTCGATCCAACAGGCCTCTATACAGATGAGCAGATATGGAAGAGCTTGGAACGCTGTCAACTGAAAGATGTGGTGGCTGCTAAGCCAGAGAAACTTGATTCTTTAGTGGTCGATAATGGAGAGAATTGGAGTGTGGGACAAAGACAACTTCTCTGTTTGGGGAGAGTTATGCTAAAGCACAGTCGGCTCCTGTTCATGGACGAGGCCACAGCTTCTGTTGATTCCCAGACCGATGCCATCATTCAAAAGATCATTCGTGAGGACTTTGCTGCTTGCACAATAATCAGCGTTGCACATAGAATACCTACAGTCATGGACTGTGATAGGGTGCTAGTCATAGATGCAGGTAACGCTAAAGAGTTTGACAATCCTTCAGGCTTGTTACAGAGGCCGTCACTCTTTGGAGCTTTGGTTCAGGAGTATGCAAACCGCTCCTCTGGTCTTTGA 4518 0.4345 MSSWVTSLSCSSTVIRAHDEPSVSVPVQWLRFVFLSPCPQRILLFAVDVLLLLVLLVSALRKLYSKFTSGNQRSSPLHAPLVRNHNVTVRTTLWFRLTLSASLLLAVSYVLACILIFTRSTRSEWKLLDGLFWLLQAITHVVIAILIVNEKRLRAFCQPTLLRAYWIVNFFVICLFTASGIIRRVSAQETQEFSFRSDDVISFISWPFSLVLVIVGIKESTGIVSGETEVDTDDEAKLHEPLLSKTDVTSFASASFLSQAFWHWMNPLLSKGYQSPLKIDEVPYLSPEHRAERMSVKFQQCWPKPHVRTEHPVRYALLRCFWKEIAFTAFLAVVRLSVMFVGPVLIQNFVDFAAGKRSSPYEGYYLVLILLVAKFVEVLAMHHFNFNSQKLGMLIRSTIISSLYKKGLKLSCSSRQDHGVGQIVNYMAVDAQQLSDMILQLHALWMMPVQLAIALMLLYNCLGASAVTAMLGIAGVIVFSVYGTHTNNRYMFNVMINRDSRMKAINEMLSYMRVIKFQAWEEKFNDRILAFRQSEFEWLTKFMYSIGGNVVVMWMTPVFISTLTFATAVLLGVPLDAGTVFTTTSIFRIVQEPIRTFPQSMISLSQAMISLGRLDNYMLSKELADSTVERTEGCDGDIAVQVNDAVFSWEDDSEEVVLENINLEIRKGELTAIVGTVGSGKSSLLASILGEMHKLAGKVRVCGSTAFVAQTSWIQNGTIQENILFGLSMDTEKYREVIRVCCLDKDLEMMDYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDTYLLDDIFSAVDAHTGTEIFKECLRGALKNKTILLVTHQVDFLHNVDLILVMRDGMIVQSGKYDYLLDSGLDFTALVAAHETSMELVERSATTTAENSPRSSNQPNTSSDNGKVNGDNGSINQVKSEKEGSKLIKEEERETGKVNLHVYKLFCTEAYGWWGVIVVLLLSLLWQASTMATDYWLAYETSEKRAMSFNPSVFISVYAIIAAVSAVLVSMRVFAFMIIGLKTCQIFFSQILQSILHAPMSFFDTTPSGRILSRASTDQTNVDIFLPIFMNIAISIYITALGILIITCQNAWPTVFLIIPLIWLNIWYRGYYLTTSRELTRLDSITKAPVIHHFSESIAGVTTIRSFRKQERFFEENIKRLDANLRMDFHNNGANEWLGFRLELLGSLIFCLSALFMIILPSSIIKPENVGLSLSYGFTLNGVMFFATYVSCFIENKMVSVERIKQFTKIPSEAAWHVKDRAPPPSWPTHGNVDLKDLQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGTIIIDGIDISFLGLHELRSRLGIIPQEPVLFEGTVRSNVDPTGLYTDEQIWKSLERCQLKDVVAAKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAIIQKIIREDFAACTIISVAHRIPTVMDCDRVLVIDAGNAKEFDNPSGLLQRPSLFGALVQEYANRSSGL* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01877 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1497 IPR003439 GO:0005524
Pte18g01877 1505 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524|GO:0016887
Pte18g01877 1505 CDD ABCC_MRP_domain1 640 839 - -
Pte18g01877 1505 FunFam ABC transporter C family member 10 309 622 - -
Pte18g01877 1505 MobiDBLite consensus disorder prediction 872 918 - -
Pte18g01877 1505 Coils Coil 1495 1505 - -
Pte18g01877 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Pte18g01877 1505 SUPERFAMILY ABC transporter transmembrane region 943 1243 IPR036640 GO:0005524|GO:0016020
Pte18g01877 1505 SMART AAA_5 667 848 IPR003593 GO:0016887
Pte18g01877 1505 SMART AAA_5 1289 1473 IPR003593 GO:0016887
Pte18g01877 1505 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Pte18g01877 1505 CDD ABC_6TM_ABCC_D2 956 1238 IPR044726 GO:0140359
Pte18g01877 1505 Gene3D ABC transporter type 1, transmembrane domain 907 1244 IPR036640 GO:0005524|GO:0016020
Pte18g01877 1505 Gene3D ABC transporter type 1, transmembrane domain 314 618 IPR036640 GO:0005524|GO:0016020
Pte18g01877 1505 Gene3D - 619 887 IPR027417 -
Pte18g01877 1505 Pfam ABC transporter transmembrane region 947 1205 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01877 1505 Pfam ABC transporter transmembrane region 327 593 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01877 1505 CDD ABCC_MRP_domain2 1261 1481 - -
Pte18g01877 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 252 1499 - -
Pte18g01877 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 861 IPR027417 -
Pte18g01877 1505 FunFam ABC transporter C family member 4 623 882 - -
Pte18g01877 1505 FunFam ABC transporter C family member 5 909 1244 - -
Pte18g01877 1505 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Pte18g01877 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1254 1496 IPR027417 -
Pte18g01877 1505 SUPERFAMILY ABC transporter transmembrane region 316 618 IPR036640 GO:0005524|GO:0016020
Pte18g01877 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01877 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 947 1226 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01877 1505 Gene3D - 1246 1495 IPR027417 -
Pte18g01877 1505 MobiDBLite consensus disorder prediction 872 911 - -
Pte18g01877 1505 FunFam ABC transporter C family member 3 1246 1497 - -
Pte18g01877 1505 Pfam ABC transporter 658 790 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01877 Pte-Chr18 29631982 29638713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01877 640 856 Calmodulin-binding Proteins AT2G36910 31.330 3.24e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01877 - K05666 jre:108986854 2234.14