Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01874 ATGGTTGAAACTAGAAGAAGCTCCTCCTCATCCAAGCGAACCCTATCGTCTTCTCCTCCTTCAAGCGTCAAACGATCTAAGGTATCTGAGGCTACCTCATCAACTAGTCAACCACCGGCTGAAATGGACGGGCCAATTAAAGATTCTGGCTCTGAATCTCGAGAACCAGAGCTACAACCATCTGATCTGCCAGATGCTGATTCTCTGAAGCATGCAGATTGTGATGCAATTTTGCCTGACAAATCTCCTGTTATGCCTGTTGAAGGGGAGGCCTTGATCTCGCCGCTAAACATAGGCGAGGCTGCAGTAGATGCAGACCAGTCGAAGTTGGTTGGCCAGACGACGTTGCCTCGATTCAAAAAATGCTCTGCCAAAGTAACGAAACCTAACCACCCCAAGGCTGCTTGGGGAAAGCTTCTTTCCCAGTGTTCTCAGAATCCTCATCTGACAATGAGTGGCCATCACTTCACTGTTGGCCAAGGTCGTCAATGTAATTTGTGGCTGAAAGACCCATCGATTAGTAAGGTTTTGTGCAAATTGAGGAATATAGAGTATGGTGCTTCGTCTGGTGCACTACTAGAAATTATGGGTGGCAAAGGAAGTGTTCTGGTTAACGGCAAGATCCATCATAAGAATTCTCATGTTATTCTAAATAGTGGTGATGAGTTGGTCTTCGATTCTTCTGGCAGGCATGCATATATTTTTCAGCAGCTTAATACAGATGATGTCTCTGCTGCTTGCGTACCATCTATAAGTATTCTAGAAGTTCAGAGTGCTCTGACAAAGGCAATGCGCATTGATGCAAGATCTAGAGACTCTTCAGCAGTTACTGGAACTTCAATATTAGCATCTTTGTCCAGTCGCCATAAAGATTTATCTCTACCTCTGTCACATTCTAAAGCTGGTGAAGCTGTCCAACAGAATACTGAGGTTTTAACACCTTCCTCTGGGTGTCAGGGTGGCAGTCCAGATATTGAAATGAAGGATGCCATTATCAGTAATGATTGTGCTGATGAAGTTGGATCGCCAGAAAAAAATGTCATTCCATCCTCTGGTCCTGTCAATGGAAACCCTGCAGTTGATTGCAATGATCCCGATGCTTGTGTGGATGCTGAAATGTTGAAGCTTAGTGGGGCAAAGCAAGAATACCGACCACTGCTGCGGATGCTTGGACACTCACCAGATGTTGATTTAAGTAATAGTCTTTACAAGATGTTTGATGGGAAAAAGGAAAGCGTTAAGGATAATGATCCCTCTAATACAATGGCATCAACCAGACGGCATGCATTTAAAGACAGTTTACTGAACAGGATTCTCAGTCCTGACTCTATTGATGTTTCATTTACAAGTTTCCCATACTACCTGAGTGAGACAACCAAGAGTGTTCTCATTGCTTCGACATTTATACACTTAAAGTGCCATGCATTTACAAAATTAGCTTCTGATCTTCCTACTGTGTGCCCGAGGATACTGTTATCCGGTCCTGCAGGTTCAGAGATATATCAGGAAACTCTGGCAAAGGCCCTTGCCAAGCATTTTGGAGTGAGACTTCTGATAGTTGACTCACTTCTATTGCCTGGGGGAATTCCATCTAAAGATAATGATTCTTCCAAAGATAGTTCAAGGCCTGAGAGAACATCTGTATTTGCAAAGCGAACATCCCATGTTTCTGCCTTACATCACAAGAAACCGACCTCTAGTGTTGAGGCTGATATTATTGGTGGATCAACCTTGAGCTCTCAAGGAGTGCCAAAACAGGAGACATCTACGGCATCATCAAAAGGCACAGCCTTAAAGAAAGGTGATCGAGTAAAATTTGTGGGTACAGCACCTTCTGGGATCTCGTCACTACAGAATGGGACTTCAAGGGGCCCAAGTTATGGTTGTCGGGGCAAAGTTCTCCTTGCTTTTGAAGATAATGGATCTTCTAAAATTGGTGTTAGATTTGATAAATCAATTCCTGATGGTAATGATCTTGGTGGATTGTGTGAAGATGATCATGGTTTTTTTTGCTCTGCAAATCATTTACTACGAATAGATGGTGCCGGTGGGGATGATGTTGACAAGCTTGCAATTAATGAACTCTTTGAGGTCGCAGCGAGTGAAAGTAAAGCTAATGCTTTGATATTGTTCTTGAAAGACATTGAAAAGGCTGTGGTGGGCAACTCAGACGTGTATACAGTTTTAAAAAGTAAACTTGAGAATTTGCGCCAGAACATCATCGTAATTGGGTCTCATACACAGATGGACAACCGTAAAGAAAAGTCTCATCCTGGTGGTCTTCTGTTTACAAAGTTTGGAAGTACTCAGACTGCATTACTTGACCTTGCATTTCCGGATAACTTCAGTAGACTGCACGATAGGAACAAAGAAACTCCCAAGGCAATGAAGCAACTCACTCGGCTTTTTCCTAACAAAGTTACAATCCAGGCCCCTCAGGATGAGGCATTACTTTCTGACTGGAAGCAGCAACTGGAACATGACATTGAAACTATGAAAGCGCAATCAAATATAATGGCCATTCATGCAGTTCTCAACAAAACAAACTTGGATTGCCCAGATCTTGATACATTGTGCATTAAGGATCAATCCTTAACAACTGAAAATGTTGAGAAAATTATCGGATGGGCATTAAGTTATCATTTTATGCACTTCTCTGACGCTGCTGTGAAAGATTCTAAACTTGTGATTTCAACTGAGAGTATTAAATATGGTTTAAACATTTTTCAAGGCATTCAAAATGAGAGCAAGAGCTTAAAGAAATCATTGAAGGATGTGGTCACAGAAAATGAATTTGAGAAAAAACTTCTTGCTGATGTAATTCCACCAACTGACATTGGTGTCTCATTTGATGATATTGGAGCCCTTGAAAATGTGAAGGACACCTTGAAGGAATTGGTGATGCTTCCACTTCAGAGACCTGAATTGTTTTGCAAAGGACAGCTGACTAAGCCTTGCAAGGGGATATTACTCTTTGGTCCTCCTGGCACGGGAAAGACAATGCTTGCAAAGGCAGTTGCAACTGAAGCTGGTGCGAATTTTATCAATATATCAATGTCAAGCATTACATCTAAGTGGTTTGGGGAAGGTGAAAAATATGTCAAAGCTGTTTTCTCTCTCGCCAGCAAAATTGCTCCAAGTGTTGTTTTTGTTGATGAGGTCGATAGTATGTTAGGAAGACGAGAAAACCCTGGTGAGCATGAGGCCATGCGTAAAATGAAAAACGAGTTCATGATGAATTGGGATGGACTGCGCACCAAGGATAAAGAGCGTGTGCTTGTTCTTGCCGCAACAAACAGGCCATTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGTAGGTTGATGGTTAATTTGCCCGATGCCTCAAATCGAGGAAAAATTCTGAGCGTCATTTTAGCCAAAGAAGAGCTGGGTCCTGATGTTGATCTGGAAGCTCTTGCAAATATGACTGATGGGTATTCTGGAAGTGACCTAAAGAATTTCTGTGTATCGGCAGCATATTGTCCTATCAGAGAGATTTTGGAGAAGGAAAAAAAGGAGAAAAGTTTAGCTGCATCCGAGAATAGACCCTTACCTTCATTATTGAGCAGTGCAGATGTCCGTCCTCTGAAAATGGAGGATTTTAAGTATGCACATGAGCAGGTCTGTGCAAGTGTTTCAGCAGACTCCTCAAATATGAACGAGCTTCTGCAATGGAATGACCTTTATGGAGAAGGTGGATCGAGGAAGAAGAGTCCTTTAAGTTATTTCATGTAG 3762 0.4229 MVETRRSSSSSKRTLSSSPPSSVKRSKVSEATSSTSQPPAEMDGPIKDSGSESREPELQPSDLPDADSLKHADCDAILPDKSPVMPVEGEALISPLNIGEAAVDADQSKLVGQTTLPRFKKCSAKVTKPNHPKAAWGKLLSQCSQNPHLTMSGHHFTVGQGRQCNLWLKDPSISKVLCKLRNIEYGASSGALLEIMGGKGSVLVNGKIHHKNSHVILNSGDELVFDSSGRHAYIFQQLNTDDVSAACVPSISILEVQSALTKAMRIDARSRDSSAVTGTSILASLSSRHKDLSLPLSHSKAGEAVQQNTEVLTPSSGCQGGSPDIEMKDAIISNDCADEVGSPEKNVIPSSGPVNGNPAVDCNDPDACVDAEMLKLSGAKQEYRPLLRMLGHSPDVDLSNSLYKMFDGKKESVKDNDPSNTMASTRRHAFKDSLLNRILSPDSIDVSFTSFPYYLSETTKSVLIASTFIHLKCHAFTKLASDLPTVCPRILLSGPAGSEIYQETLAKALAKHFGVRLLIVDSLLLPGGIPSKDNDSSKDSSRPERTSVFAKRTSHVSALHHKKPTSSVEADIIGGSTLSSQGVPKQETSTASSKGTALKKGDRVKFVGTAPSGISSLQNGTSRGPSYGCRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDHGFFCSANHLLRIDGAGGDDVDKLAINELFEVAASESKANALILFLKDIEKAVVGNSDVYTVLKSKLENLRQNIIVIGSHTQMDNRKEKSHPGGLLFTKFGSTQTALLDLAFPDNFSRLHDRNKETPKAMKQLTRLFPNKVTIQAPQDEALLSDWKQQLEHDIETMKAQSNIMAIHAVLNKTNLDCPDLDTLCIKDQSLTTENVEKIIGWALSYHFMHFSDAAVKDSKLVISTESIKYGLNIFQGIQNESKSLKKSLKDVVTENEFEKKLLADVIPPTDIGVSFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMMNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDASNRGKILSVILAKEELGPDVDLEALANMTDGYSGSDLKNFCVSAAYCPIREILEKEKKEKSLAASENRPLPSLLSSADVRPLKMEDFKYAHEQVCASVSADSSNMNELLQWNDLYGEGGSRKKSPLSYFM* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01874 1253 MobiDBLite consensus disorder prediction 1 69 - -
Pte18g01874 1253 MobiDBLite consensus disorder prediction 530 597 - -
Pte18g01874 1253 Pfam FHA domain 157 225 IPR000253 GO:0005515
Pte18g01874 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1228 IPR027417 -
Pte18g01874 1253 SMART AAA_5 985 1122 IPR003593 GO:0016887
Pte18g01874 1253 MobiDBLite consensus disorder prediction 535 549 - -
Pte18g01874 1253 MobiDBLite consensus disorder prediction 47 69 - -
Pte18g01874 1253 ProSitePatterns AAA-protein family signature. 1092 1111 IPR003960 GO:0005524|GO:0016887
Pte18g01874 1253 Gene3D - 1121 1215 - -
Pte18g01874 1253 CDD RecA-like_ATAD1 952 1118 - -
Pte18g01874 1253 MobiDBLite consensus disorder prediction 570 596 - -
Pte18g01874 1253 SUPERFAMILY SMAD/FHA domain 136 230 IPR008984 GO:0005515
Pte18g01874 1253 Gene3D - 135 246 - -
Pte18g01874 1253 Pfam AAA+ lid domain 1142 1178 IPR041569 -
Pte18g01874 1253 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 947 1123 - -
Pte18g01874 1253 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 429 1252 - -
Pte18g01874 1253 Pfam ATPase family associated with various cellular activities (AAA) 989 1118 IPR003959 GO:0005524|GO:0016887
Pte18g01874 1253 Gene3D - 947 1226 IPR027417 -
Pte18g01874 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 835 IPR027417 -
Pte18g01874 1253 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01874 Pte-Chr18 29608693 29618665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01874 948 1233 Calmodulin-binding Proteins AT3G56690 36.897 2.86e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01874 - - qsa:O6P43_007158 1786.54