Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01838 ATGTCAAATGCCGACGGAACCACGAACGGCTCTGCTATGGACCCTAATAGACAGCAGTCGTCCGTTAACGGTAACGGTAGCGGACCTCTAGCTGTCAAGAAGCCTCCGTCTAAGGACCGTCACAGTAAGGTTGACGGCCGAGGACGACGTATACGCATGCCGATTATTTGCGCCGCGCGGGTCTTTCAACTTACTCGCGAGTTGGGTCATAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGGCAAGCCGAGCCCTCTATCCTAGCTGCTACAGGCACTGGCACCACTCCGAATAGCTTCTCCACTGTTTCTGTCTCCGTTCGAGGTGGTTCTGTCGGAGGTGGCTCGACCGCTCTCTCCTCCACAACATCTTCAACTAGCCCGCTTGAACATAAATCCTTACTTGCTCCTTCGCCCTTCATCCTCGGAAAGCGTATGAGGACGGAAGAAGATGCCGACAAGGATAACGGTGGAGGGGGCGGAGTGGTTGCCTTGGGACCCACCGTGGGGACATTGGTTGGACCCACTGCCGCTCACGCCGGACTATGGGCCCTTCCGTCAAGACCAGATTTTGGTCAATTTTGGAGCTTTGCAGCAGCGGCCGCCCCAACTCCAGACTTGTTAGTGCAGCAGACAGTGACGGCAGCTCAGCAAAATCATAATGCGTCTCTCTTCGTCCATCATCAGCACCAGCAACAGCAGCAGTCGATTGGGGAAGCATCTGCGGCGAGGCTGGGAAATTACCTTCCTGGATACCTCAATTTACTGGCTTCACTGTCGGGAGGGCCTGGAAATTCGGGTAGGAGAGACGATGAGTACCGTTGA 828 0.5531 MSNADGTTNGSAMDPNRQQSSVNGNGSGPLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSILAATGTGTTPNSFSTVSVSVRGGSVGGGSTALSSTTSSTSPLEHKSLLAPSPFILGKRMRTEEDADKDNGGGGGVVALGPTVGTLVGPTAAHAGLWALPSRPDFGQFWSFAAAAAPTPDLLVQQTVTAAQQNHNASLFVHHQHQQQQQSIGEASAARLGNYLPGYLNLLASLSGGPGNSGRRDDEYR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01838 275 MobiDBLite consensus disorder prediction 34 49 - -
Pte18g01838 275 MobiDBLite consensus disorder prediction 1 49 - -
Pte18g01838 275 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Pte18g01838 275 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 238 IPR005333 GO:0003700
Pte18g01838 275 Pfam TCP family transcription factor 37 113 IPR017887 -
Pte18g01838 275 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01838 Pte-Chr18 29366356 29367183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01838 30 276 TCP Transcription Factor Family AT5G23280 61.600 1.57e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte18g01838 TCP 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01838 K16221 - qsa:O6P43_020036 315.079