Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01834 ATGTCCCTCATTTGTTTCCTGTTCTCAATCTTATTCACTTTCCCTCTTGGTTTGCTCTCTCAAAAACCACCCAACCCTAATAATGTTTCTGGTTGCCCTCTGAACTTCACCGTTCTCAGGGAGCTCACCCAAAGCTCTGGCACGCCTGCTGTTGACGTGTCAACTAGGTGTCAGTACACCCGGCAAGCACTTCGTCTGGTCCAATCCGACTACCTGCGGAGAACAGGGTTTTTCCTCCCACCCTTTAATTCTTCTGAGGCTTGTTGGGATTCCTTCCAATCCCTCGTCAACCAATTCAACCCAGGTTTTGATATTCGCTCTTCATGTGGGTTCCAAACAAGTTGGATCTCGCAAGGTTGTTTGAACATCACAACCAAGGCCCAATTTGTAGCTTTGGTTCCTAATACAACGTTGCAAGATGTGGTGAATAACTGCAATCAATCTCTCGAGAACAATTCTCCTTGTGCCTTGTGTACTACAAGCTTGTCAAGCCTTCAAGCTTCATATTTGAATGGTGCCTCAATTGGGAATATCTCCGATTGCACAGCTTACCCCTCCATTTATGCTGCTGCCTTTGCTAATCAGTATGGCCCAACTGACGGCGGTACTGCCAAGTGCTTGTTCAATTTTAATTTTACTCCCGCTAGTTCAGGAGGTAAAAAGAGAAAGATTGTTATTTTGGTGGTTGTGCTTGGTTTTATGTTTGGGTTATTTTCGATAAGTGCTGGGTTTTGGATTTTCTGGAGAAAGAAGATGAACAAGAAAAGAGTTAAGAGGGAAGAGATTAACAGAGCTGAGATAGGCTTCAGTTCTGGATTGGACGCAATGAATGAGAGTACCACTTTGGTTAGGTTCACGTTTGAAGACATTAGGAAAGCAACTGGGAATTTCTCCAGGGATAATATCATTGGGAGAGGAGGGTATGGGAATGTCTACAAAGGGGTGCTCCCAGATGGGACTGAAGTTGCATTGAAAAGGTTTAAGAACTGTTCTGCTGCAGGTGATGTAAGCTTCACTCATGAGGTGGAAGTCATTGCCAGTGTGAGGCATGTAAACCTAGTAGCTTTGAGAGGTTATTGTACTGCCACGACTCATTTTGAAGGTCATCAGAGAATCATTGTGTGTGATTTGATGAAGAATGGGAGTCTTCATGATCATTTATTTGGAGAGAAGGAGAACAGACTGAGTTGGCCAATTCGACAAAGGATTGCATTGGGGACTGCGAGGGGTTTGGCTTATTTGCATTATGGAGCTCAACCTACAATTATCCATAGGGATATCAAAGCCAGTAATATCCTACTTGATGACAGGTTTGAAGCAAAAGTTGCAGACTTTGGACTTGCAAAGTTCACCCCTGAAGGAATGACGCACTTGAGTACAAGGGTAGCAGGGACAATGGGATATGTTGCTCCTGAGTATGCATTATATGGACGACTAACTGAGAGGAGTGATGTTTATAGTTATGGTATTGTGCTTCTTGAGCTTTTGAGTGGGAAGAAAGCCCTTCAAACCAATGATGAAAGTCAAACCTATTCTGTGACTGATTGGGCTTGGTCTTTGGTTAGGAGTGGCAGAACTTTGGATGTAATTGAAGATGGAATGCCAGAATTGGGTTCACCTGAGATGCTTGAGAAGTATGTTTTGGTTGCTGTTCTTTGTTCTCATCCACAATTATATGCTAGACCAACAATGGATCAAGTTGTCAAAATGTTGGAGACAGATGTCTTGATTCCTTCCATACCTGAACGACCCATTCCTCTTGTTTCCGAGATCCATGATATTGAGAGGTCTGCGAGCAGTGGTGGCTCTGGTCAGCTCAGTAGTCCAACTGGCTATCAGTCATATACATTTGAGAGTGTCCCCTCTTCTACTTCAAAGGAAGTTAGGGGAAGTTCAGGATCGATATGA 1908 0.4366 MSLICFLFSILFTFPLGLLSQKPPNPNNVSGCPLNFTVLRELTQSSGTPAVDVSTRCQYTRQALRLVQSDYLRRTGFFLPPFNSSEACWDSFQSLVNQFNPGFDIRSSCGFQTSWISQGCLNITTKAQFVALVPNTTLQDVVNNCNQSLENNSPCALCTTSLSSLQASYLNGASIGNISDCTAYPSIYAAAFANQYGPTDGGTAKCLFNFNFTPASSGGKKRKIVILVVVLGFMFGLFSISAGFWIFWRKKMNKKRVKREEINRAEIGFSSGLDAMNESTTLVRFTFEDIRKATGNFSRDNIIGRGGYGNVYKGVLPDGTEVALKRFKNCSAAGDVSFTHEVEVIASVRHVNLVALRGYCTATTHFEGHQRIIVCDLMKNGSLHDHLFGEKENRLSWPIRQRIALGTARGLAYLHYGAQPTIIHRDIKASNILLDDRFEAKVADFGLAKFTPEGMTHLSTRVAGTMGYVAPEYALYGRLTERSDVYSYGIVLLELLSGKKALQTNDESQTYSVTDWAWSLVRSGRTLDVIEDGMPELGSPEMLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDVLIPSIPERPIPLVSEIHDIERSASSGGSGQLSSPTGYQSYTFESVPSSTSKEVRGSSGSI* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01834 635 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 258 376 - -
Pte18g01834 635 Pfam SPARK 29 173 IPR043891 -
Pte18g01834 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 115 610 - -
Pte18g01834 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Pte18g01834 635 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 378 579 - -
Pte18g01834 635 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pte18g01834 635 Gene3D Phosphorylase Kinase; domain 1 255 376 - -
Pte18g01834 635 Pfam Protein kinase domain 298 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01834 635 SMART serkin_6 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01834 635 CDD STKc_IRAK 303 572 - -
Pte18g01834 635 MobiDBLite consensus disorder prediction 596 635 - -
Pte18g01834 635 Gene3D Transferase(Phosphotransferase) domain 1 378 576 - -
Pte18g01834 635 ProSiteProfiles Protein kinase domain profile. 297 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01834 635 SUPERFAMILY Protein kinase-like (PK-like) 279 592 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01834 Pte-Chr18 29338517 29341252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01834 30 617 Receptor kinase-like Gene Family AT2G48010 65.313 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pte18g01834 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01834 - - cave:132170685 907.516