Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01798 ATGACTCGATCTCCATGGCTGTGCATTCCGAAATTTTCTGGTTCTTGTAACATCTTGTTAAATCGCGGTTTGTTAATTTCTAACATCTTGTTATTTTTTCCGAAGGTTATTGATGTTCTGCATCCTGGAAGACCAAATGTCTCCAAGGCTGAATTGAAGGAAAAATTGGCCCGGATGTACGATGTGAAGGATGCAAATTCTATCTTTGTCTTCAAGTTCCGGACCCATTTTGGAGGTGGAAAATCGACAGGATTTGGTTTGATCTATGATTCGGTCGAGAATGCAAAGAAGTATGAGCCCAAGTACAGGCTTATAAGGAATGGATTAGCTACAAAGGTTGAGAAGTCAAGGAAGCAAATGAAGGAAAGAAAGAACAGAGCTAAAAAGATCCGTGGTGTAAAGAAAACAAAGGCCGGTGATGCTGCAAAGGGTGGAAAGAAGAAATGA 447 0.4049 MTRSPWLCIPKFSGSCNILLNRGLLISNILLFFPKVIDVLHPGRPNVSKAELKEKLARMYDVKDANSIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAAKGGKKK* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01798 148 Hamap 30S ribosomal protein S24e [rps24e]. 14 117 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte18g01798 148 ProSitePatterns Ribosomal protein S24e signature. 77 99 IPR018098 -
Pte18g01798 148 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 36 119 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pte18g01798 148 MobiDBLite consensus disorder prediction 113 148 - -
Pte18g01798 148 Coils Coil 110 130 - -
Pte18g01798 148 Pfam Ribosomal protein S24e 36 114 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte18g01798 148 Gene3D - 35 143 - -
Pte18g01798 148 PANTHER 40S RIBOSOMAL PROTEIN S24 36 142 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01798 Pte-Chr18 29124995 29126797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01798 19 143 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 76.800 1.25e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01798 K02974 - csv:101209776 192.971