Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01797 ATGCCTAGCGCCATGGGAAGAAACCTAATCAACCTCTGTTTCGTAAAGATAAAAAGTCCATTAGAAATTGCTCACTCCTCTTCTTCTACCCCAAATTCAGCAAATACAGACGTTCAAGACCGCCCAAGTGCCACCAAGAACAGCAGCACTCGTCCCTATCCCAACACTTACTCATCCATCCTCGTAAAAAATTTCAACTCCTTATATGACAATAATTTTGACTACGCCTCCAAATCTTTGACGAACACCTCTTCTGATCTATCCAACACTTCCACTGCCACTGCCTCTACTTCCTCTCATGAACCTGATCCTGATCCTGAACATGCTGACTTCGTCACTGCCTTTGCCTCGAAACGCTTTTTCTTCTCTTCACCAGGTCGTTCCAACTCTATAATAGAATCTACAAACAGTAGTATAGAATGCTGTATGTACTCCTCCTCGTCATCGTCTATGGAAGTCACTCGCCAGGGTAAGAATGAAAACAACAACGATAAGCTCGTTATTGATAACAGCATGGCCGTCCCCACATATTCTCCAGACCCATATGCAGATTTCCTGAGGTCTATGCAGGAGATGGTAGAGGCTCGTGCAAGTACAGAGCCATCGATGGACGCGAAGTTCAACTGGAAATTTTTACACGAGCTTCTTCTGTGTTACCTTGCCCTCAACCCCCATCACACCCACAAGTTCATCGTGCGTGCTTTCGCCGATCTTCTGTTAAGCCTCATGTCCTCGAAGGCCGCAAGGCGCCAGACGTCGGAGTCCCCTCCGACAATGGGGGATAGGTGA 789 0.4689 MPSAMGRNLINLCFVKIKSPLEIAHSSSSTPNSANTDVQDRPSATKNSSTRPYPNTYSSILVKNFNSLYDNNFDYASKSLTNTSSDLSNTSTATASTSSHEPDPDPEHADFVTAFASKRFFFSSPGRSNSIIESTNSSIECCMYSSSSSSMEVTRQGKNENNNDKLVIDNSMAVPTYSPDPYADFLRSMQEMVEARASTEPSMDAKFNWKFLHELLLCYLALNPHHTHKFIVRAFADLLLSLMSSKAARRQTSESPPTMGDR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01797 262 MobiDBLite consensus disorder prediction 83 109 - -
Pte18g01797 262 Pfam Transcriptional repressor, ovate 178 242 IPR006458 -
Pte18g01797 262 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 244 IPR038933 GO:0045892
Pte18g01797 262 NCBIfam uncharacterized plant-specific domain TIGR01568 172 243 IPR006458 -
Pte18g01797 262 MobiDBLite consensus disorder prediction 83 100 - -
Pte18g01797 262 ProSiteProfiles OVATE domain profile. 174 241 IPR006458 -
Pte18g01797 262 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01797 Pte-Chr18 29122378 29123621 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte18g01797 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01797 - - qsu:112014051 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01797 18 29122378 29123621 Pte18g01797 18 29122378 29123621 RCT