Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01789 ATGGCGAGGAGCAAGGTGCACGAATTGAAAAACAGATTTGTGATCCAGTTGAAAGAGCTTAAAGCAGAACTTGTTTTGCTTCGTGTTGCCAAGGTCACTTGTGGTGCCGCCAACAAGCTCTCCAAGATCAAGAAGACCCGCGCCATCCGGAGGCATCTTACCAAAAACCAGGCCTCACGGAAGATAGAGCGCCAGAAGAAGGAGGAGATGTACTTTCCTTTGAGGAAGTACGCAATTAAGGTTTAG 246 0.4797 MARSKVHELKNRFVIQLKELKAELVLLRVAKVTCGAANKLSKIKKTRAIRRHLTKNQASRKIERQKKEEMYFPLRKYAIKV* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01789 81 Gene3D - 42 81 - -
Pte18g01789 81 FunFam 60S ribosomal protein L35 42 81 - -
Pte18g01789 81 PANTHER 60S RIBOSOMAL PROTEIN L35 44 81 IPR045059 GO:0000463|GO:0022625
Pte18g01789 81 NCBIfam 50S ribosomal protein L29 16 47 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01789 Pte-Chr18 29055385 29055952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01789 1 82 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 53.226 1.41e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01789 K02918 - twl:120007201 102.064