Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01783 ATGTTCTTTCTGTCTTCTCTTGCATTACTGTATGGTTTAGTGGTATATTGGTCTAATCTATCTGTAGGTGAGAAAGGCATTGGCAAATCAACTGGAAAACCCCTCCACTACAAGGGGACATGCTTCCATCGTATCATTAAAGGTTTTATGGCCCAGGGTGGTGATTTTTCGAGGGGAAATGGAACCGGGGGAGAATGCATATATGGGGGGAAATTTGCAGATGAAAATTTTGTTCTGAAGCATGATGGGCCTGGTCTTCTTTCAATGGCTAATAGCGGTCCAGACACAAATGGGTCCCAATTTTTTATTACCTTCAATGGCCAACCTCATCTTAATAAGAGGCATGTTGTCTTTGGTAAAGTCATCAGGGGGATAGACGTTCTAAAGAAAATTGAACAGGTTGGAACAACAGAAGGCAATCCTACCCAGCCAGTGAAAATTGTTGATTCTGGTGAGATTTCTGAAAGTAATATTCTCAGTAGGACACAGAAAGAGAAAGGTAAAAAGAAAAAATCAGTCAAGCCCTCAATATCAGAAGACAGTTCTGAATCTTCTGATAAAAAGTCAAGGAGGAGGAAACGATCTCTGAAGGACAAAAGGAGAAAAAGGAGATATTCATCATCTGAATCATACAGCTCAGATACTGACTGTGATTCCTTTTCTTCAGATTCTGATTCGGAATCAGATTCAGATTCACTATCTGATTCAAGTTCTTACTCTATAGATGAGAAGCATAGAAAAAGTAAGTCTAGGAAAAGAGGAAAGCACAGCCACAAGCATGGGAAGAAGAGGAAAATTGGAAAAAGAGAGAAGAAGAAGAGAGGTCGAGCTGATAAAAAATCAAGACAAAGGAGTTATTCAGAAAGTGAGAGTACAACGAGCAGCAAAAGCAGTAGCAGTGGTTCTGATGATGAGACAACAAATAATCGTGTCCATTCTGGTAAAAGTAGCAACTCTGCTAAAGAAAAAGCAAAGGGAAAACTGGGTGATGGCAATCAATCTCCTAGCCTGCCTATAAAGAAAGCAATTCCACAGCTCCCTGATCATGATATCAGAGGAACTGAGGACATGCAACTACAGGAAGAAGGTGAATTGTCACGTGAGAATGAGGAACTTCTGAACGACGGAAATAAAATTAGACCCAACTCCAGGAGCAAGAGTCCAAAGAGAAGGTCAAGAAATAATTCTAGGCACAGCAGTCCAAGTGGTAGTCCTACAACGTCAAACAGAAGGAGTCCAGCTGCCTCTGCCCACAAAACCTCTGAACCTTCTGCGGCTAAACTTGGTCAGGTACTGTCAAGAAGTCCTTCTCCAAATGGACCTCCAAAGCGTATTAGGAAAGGCCGTGGCTTCACCGAGCGCTATGCCTTTGCTCGCAAATACCGTACCCCATCTCCTGAGCGCTCACCTCGTATTTCTTACGGTTATCAACGCAGGAGGAACCACGAACGGTATACGAGCTACAGACGTTATTCCGAGCGCTCGCCCCAAAGACGCTACCGGAGCCCACCAAGGGGTAGGAGGAGTCCTCCAAGATACTCTCACAGAAGAAGCCCGAGCAGGAGTCTTTCCCGTAGTCCAGATTCTTGTCACAGGCGCCAATACAGAGACCGAAGCCGAAGCCATAGCCATAGCCCAATCCGAAGTCCTAGTCCTACAGACAAACGCCCACCATTGAGTGACAGGTTGAAGTCTCGACTTGGACCTCCAAATGGCCAGCATTCTCCTGACAAAAGAAGACAGACGTCACAGTCAAGGTCAAGATCTCCACATGCTATGTCACCAAAGCTTCGCAACAGAAAGATATCTGCCTCTCCAAGCAGGTCTTCATCAAGCCCTTGTGGACATATAGGACTGGTTTCCTATGGAGATGCAACACCTGATTCTGAAGCTAGCTAG 1899 0.4455 MFFLSSLALLYGLVVYWSNLSVGEKGIGKSTGKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGECIYGGKFADENFVLKHDGPGLLSMANSGPDTNGSQFFITFNGQPHLNKRHVVFGKVIRGIDVLKKIEQVGTTEGNPTQPVKIVDSGEISESNILSRTQKEKGKKKKSVKPSISEDSSESSDKKSRRRKRSLKDKRRKRRYSSSESYSSDTDCDSFSSDSDSESDSDSLSDSSSYSIDEKHRKSKSRKRGKHSHKHGKKRKIGKREKKKRGRADKKSRQRSYSESESTTSSKSSSSGSDDETTNNRVHSGKSSNSAKEKAKGKLGDGNQSPSLPIKKAIPQLPDHDIRGTEDMQLQEEGELSRENEELLNDGNKIRPNSRSKSPKRRSRNNSRHSSPSGSPTTSNRRSPAASAHKTSEPSAAKLGQVLSRSPSPNGPPKRIRKGRGFTERYAFARKYRTPSPERSPRISYGYQRRRNHERYTSYRRYSERSPQRRYRSPPRGRRSPPRYSHRRSPSRSLSRSPDSCHRRQYRDRSRSHSHSPIRSPSPTDKRPPLSDRLKSRLGPPNGQHSPDKRRQTSQSRSRSPHAMSPKLRNRKISASPSRSSSSPCGHIGLVSYGDATPDSEAS* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01783 632 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Pte18g01783 632 MobiDBLite consensus disorder prediction 600 616 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 345 377 - -
Pte18g01783 632 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 19 152 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 MobiDBLite consensus disorder prediction 246 280 - -
Pte18g01783 632 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 153 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 397 419 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 446 466 - -
Pte18g01783 632 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 36 150 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Pte18g01783 632 MobiDBLite consensus disorder prediction 526 544 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 473 500 - -
Pte18g01783 632 Gene3D - 17 154 IPR029000 -
Pte18g01783 632 SUPERFAMILY Cyclophilin-like 19 153 IPR029000 -
Pte18g01783 632 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 15 153 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 287 315 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 501 519 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 136 632 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 172 189 - -
Pte18g01783 632 MobiDBLite consensus disorder prediction 136 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01783 Pte-Chr18 29002147 29006771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01783 36 150 U-box Gene Family AT5G67530 48.718 7.24e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01783 K09566 - qsa:O6P43_006974 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01783 18 29002147 29006771 Pte18g01783 18 29002147 29006771 RCT