Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01781 ATGACGACAGGTATGGTAAGCGACCAGAACGTAGAGAAACAGCAGATTGAAAGGCAAATAGGTTGCATGGCTGGTTTCTTTCAGATCTTTGATCGCCACCAGATTCTATCCGGAAAACGAATCTACTCCACCAAACGACTCCCTCCGTCTACGCTGCAGCAGCAGAAGGCTAAACCTCGGTCTCCGCTACCTGGAAGTCCGACTGCGTCGCAGAGTCAGACCAACCTGCCGCTTCCTCTTGCTGTATTTGAGTTGAAGGAAGGGACGAGGTCTTCTTGGAAGTTTGCCAAAGAAGCTCCAAGGCTCTCTTTGGATAGCAGAGCAGTCACTGATGCCAAGGGAAGCCTCCACCCGAAAGTGGCCCGAACGAACGCAGCATTATTATCTGCAGACCGATGTGAGAATCCTGGAGATGGAAGTGACAACGACAGTGACAAGCATCGATCACCTAGCGTCATAGCGAGACTAATGGGGCTTGGACCCCTACCGAATTCAAATCCTGAACCGGAGAAAAAGGTTGAGCTCCGGAGATCTGCTTCGGAGTCAAGAGTGAACAGAGATGTCTTTCAGTATCGCTTCTTCGACAGTACCCATTTTCAGCTAAAACAACCGCATCAGTTGCAGCAGTCAGCTCGGCTGAGCAATGTGTCTAGAGATAATGTCGTATGTACGGAAAATCATAATATGGTAATGTCTAATGGCAGATTAAGAACAGTAGATCGAAAGGAATTTGCAGTGCGGAATGCGAAAATGGAGCCAAGTAAAGCTACATCCAGAGGAATTGGACAAAAAAAGAGTTTCTTCGATTCGGCTGATTTCTTTCCTGAACCAAAACAGACTGTCTCTATCTATGGAGAAATTGAGAAGAGGTTGAAGATGAGAGGGATTGATGAGCCATCAAAGGATCTCGAGACATTGAAGCAAATCCTAGAAGCCCTGCAGCTCAAGGGTCTTCTACATTCCAAGAAATCCACTAGTCAAACCAATGAGACAAATTTCGTTCACGATGGAGACTTTTCACTCGATGAATCCCCAATCATTGTTATGAAACCAGCAAGATCCGGGTCAATTTCATTGGACCGACCCGGAAACGGAAGGAATGGTAGGCATTCACCAGCTTCAAGCTTTCAGTCTAGCCCTCGAGCTCGCCGTATCGCCAACGAGACACATCTGACAGTTAGTCCTAGACGTGACAATGGACCAGATACGGACAGGGATGTACGGAACCAGAGCAGAGTGAGGAGCTTAAGTTCACCGACTCGGATCGATCGTGGCGTTAACAGAAGGAGGCCCTTGAAAACAGATACTCAGAGACAAAGGGTGACGAACGACACAGTTGAGCAGAGAAGAATCTCACCGGTTCATTCACCAAAGATCAGTTCCTTGAGAAGAAACTTATCTGATCAAGCAGTCGCAAAAGGATCACCGAGGATGATGAGAAAATCACCGTCAGCTATTTACAATCGGGACGAGAAAGGGGCGGTCGCTCCCGCTGAAGATGATCTATCTATCTTATCTGAGAGTAGCATGAGCATGTCTTCAAAGTCACCAACTGATGCAGAGAGATGGAATTTGAAGGTTGAGGATTACAGGGAAGGAAGGAATTTACTGGAGAGGTGTGATCAGCTATTACACAGCATAGCTGAAATCACAGCTTCAAACGTGGTCGAGTTACAACCGAGTCCTGTGTCAGTTCTTGACTCGTCATTTTACAGGGACGAGTCGGGTTCGCCTTCCCCAGTGACCAAACGGCAGATTGATTACCAAGATCAACCTTTGGAATGGGATGATGATATATGGGGCAGTGCAGCGGGTGAATCATCAGATGATTGTGATTTCGTTTACGTATCTGAGGTACTCCGAGCATCAAATTACGTACCAGAAGACTCTGATACATTTTTGATGCTTGAAAAGCAGCAATGTCTCAGAGGGAAAGATACCTCAGAGGTTTCAAGGCTGGAAAGGAGACTAATATTTGATACTATTACTGAAATTCTCAAGAGGAACCGCCAATTACCACCGTGGAAATCAGCTAGGGCATTAGGAGTAGGGAAGAGTCATGGGCAAGAGACGTCATTGCAGAGGATATGGGCTGAATTCAGGAGGATTAAGGAGAGGGATGAGTCAGAGGATTTGTTCGAGGTGATCTGTGGTGTGTTGAAGAAGGACTTAGCAGACGATGGAATCAATGGTTGGGGAGATTTTGCTGTTGAGATGGGAGAGTTAGTGTTGGATATGGAAAGACTCATATTCAAGGATCTGATTGTCGAGACAATTCAAGATCTCGAGGCTTTTTCCAGCCAAACTAACAGCACCGCCACAACCCCCACCCACGCCAAAGTCGCCGCGCTACGTAGAAAGTTGATGTTCTGA 2373 0.4678 MTTGMVSDQNVEKQQIERQIGCMAGFFQIFDRHQILSGKRIYSTKRLPPSTLQQQKAKPRSPLPGSPTASQSQTNLPLPLAVFELKEGTRSSWKFAKEAPRLSLDSRAVTDAKGSLHPKVARTNAALLSADRCENPGDGSDNDSDKHRSPSVIARLMGLGPLPNSNPEPEKKVELRRSASESRVNRDVFQYRFFDSTHFQLKQPHQLQQSARLSNVSRDNVVCTENHNMVMSNGRLRTVDRKEFAVRNAKMEPSKATSRGIGQKKSFFDSADFFPEPKQTVSIYGEIEKRLKMRGIDEPSKDLETLKQILEALQLKGLLHSKKSTSQTNETNFVHDGDFSLDESPIIVMKPARSGSISLDRPGNGRNGRHSPASSFQSSPRARRIANETHLTVSPRRDNGPDTDRDVRNQSRVRSLSSPTRIDRGVNRRRPLKTDTQRQRVTNDTVEQRRISPVHSPKISSLRRNLSDQAVAKGSPRMMRKSPSAIYNRDEKGAVAPAEDDLSILSESSMSMSSKSPTDAERWNLKVEDYREGRNLLERCDQLLHSIAEITASNVVELQPSPVSVLDSSFYRDESGSPSPVTKRQIDYQDQPLEWDDDIWGSAAGESSDDCDFVYVSEVLRASNYVPEDSDTFLMLEKQQCLRGKDTSEVSRLERRLIFDTITEILKRNRQLPPWKSARALGVGKSHGQETSLQRIWAEFRRIKERDESEDLFEVICGVLKKDLADDGINGWGDFAVEMGELVLDMERLIFKDLIVETIQDLEAFSSQTNSTATTPTHAKVAALRRKLMF* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01781 790 MobiDBLite consensus disorder prediction 136 150 - -
Pte18g01781 790 MobiDBLite consensus disorder prediction 368 385 - -
Pte18g01781 790 MobiDBLite consensus disorder prediction 395 411 - -
Pte18g01781 790 MobiDBLite consensus disorder prediction 45 75 - -
Pte18g01781 790 Pfam Domain of unknown function (DUF4378) 612 757 IPR025486 -
Pte18g01781 790 MobiDBLite consensus disorder prediction 127 179 - -
Pte18g01781 790 PANTHER LONGIFOLIA PROTEIN 10 71 IPR033334 GO:0051513
Pte18g01781 790 MobiDBLite consensus disorder prediction 423 445 - -
Pte18g01781 790 Pfam DUF761-associated sequence motif 141 166 IPR032795 -
Pte18g01781 790 MobiDBLite consensus disorder prediction 352 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01781 Pte-Chr18 28988489 28992756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01781 512 791 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.535 1.20e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01781 - - qsa:O6P43_006971 845.884