Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01773 ATGGAGAAGAGTAATTTGAGATATGAGTGTGAGCTCAACCTTGGAGATACGGAGTTAAGGTTGGGTTTGCCAGGTTCCGTTGACCCAAAGACACAATCATGTGTTCCTAATGTTTCGAGAAACAAGAGAGCTTTCTTAAACATCAGTGAGGAGATGGACGAGCACTCAACCACCAAGAGCAATTCTGAGGCTAGAAATGTTGCGTCTCCAGCCAAGGCGCAAGTAGTCGGATGGCCACCCATTAGATCTTACAGGAAGAGCACTCTCCAACCAAAGGAGGCTGATCATAACAATGATGGGACTGGACTGTTTGTCAAAGTAAGCATGGATGGAGCACCCTATCTAAGGAAGATTGGCCTTGAATTGTATAAGAACTATCCAGAACTCCTCCAGGCTCTTCAGAATAGGTTCAAATGCACACTTGGTGAATATTCAGAACGCGAAGGCTACCATGGATCTGAATATGTTCCTACCTATGAAGATAAAGACGGCGACTGGATGTTGGTTGGAGATGTTCCATGGGACATGTTCATAACTTCCTGCAAAAAGCTGAGGATCATGAGAGCATCAGAAGCTAAGGGCTTGGGCTGTTTATGA 597 0.4506 MEKSNLRYECELNLGDTELRLGLPGSVDPKTQSCVPNVSRNKRAFLNISEEMDEHSTTKSNSEARNVASPAKAQVVGWPPIRSYRKSTLQPKEADHNNDGTGLFVKVSMDGAPYLRKIGLELYKNYPELLQALQNRFKCTLGEYSEREGYHGSEYVPTYEDKDGDWMLVGDVPWDMFITSCKKLRIMRASEAKGLGCL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01773 198 ProSiteProfiles PB1 domain profile. 102 191 IPR000270 GO:0005515
Pte18g01773 198 Pfam AUX/IAA family 38 196 IPR033389 -
Pte18g01773 198 SUPERFAMILY CAD & PB1 domains 97 187 - -
Pte18g01773 198 FunFam Auxin-responsive protein 97 198 - -
Pte18g01773 198 MobiDBLite consensus disorder prediction 52 71 - -
Pte18g01773 198 Gene3D - 96 198 - -
Pte18g01773 198 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 193 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01773 Pte-Chr18 28950828 28952117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01773 91 195 B3 DNA Binding Superfamily AT2G46530 34.286 5.59e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte18g01773 AUX_IAA 1e-55 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01773 18 28950828 28952117 Pte18g01773 18 28950828 28952117 RCT