Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01766 ATGGAGGAAGTGGAAATGGCTAACAAAGTTGCTATTGAGAGCTGTCATAGAGTTTTAAATTTATTGTCTCAACCCCAAGATCAGTTTCAGAGCAGAAAGTTGATGATGGAAACTGGGGAGGCAGTTCTTGGATTCAAGAAGGTCGTTTCCCTCCTGAGTAATAGTTTGGGTTATGCAAGAGTCAAGAAGTTCAAAAAACTTCAAACCCCCTTTCCCCGAAGTATACTTCTAGACAATCCCATTTGTAGGACAAACCATCCATCAAAAAATCCACAGTTTCTGCAGTCCATCTTCACTGAAAATTCTTCTCAAGAATTGGGTTCCAATGTCAAGAATTCACTATATTTAGCCAACCCTTCTTTCGAATTTAGCTCAAATGGGAAAGCTCCATTACAGCTTGCGCAGCAGGCAGCAACTATACCTTGTCACTTTTTGCAGCAGCAGCAACAACATCAACAACGATTACTTCTTCAGCATCAACAGTTGAAACACCAGGCAGAAATGGTGTATAAAAGGAGCAACAGTGGCATCAATCTGAATTTCGACAACTCTAGCTGCACACCAACAATGTCTTCTAATCGGTCTTTCATATCTTCTTTGAGTATGGATGGAAGTTTAGCCAATCTTGATGGAAGTGCCTTCAATGTAATTGGAGCTTCTCAATCTTTAGATCAGAATTCTCAACATAAAATTAAGTGTTCTGCGAGAGACGATGCCAATGCAAAATGTGCAAGCAGTAGTAAATGTCATTGCTCAAAGAAGAGGAAACACAGGGTGAAAAGATCGATCAAAGTACCTGCTATTAGCAACAAGCTCGCTGATATTCCCCCGGATGATTACTCCTGGAGAAAGTACGGGCAGAAACCTATCAAGGGTTCTCCTCACCCGAGGGGATACTACAAGTGCAGCAGTATGAGGGGCTGCCCTGCAAGGAAGCATGTAGAAAGATGCTTGGAAGACCCCTCCATGTTAATAGTGACCTATGAAGGTGAGCACAACCATTCCAGGATACCAGTGCAACCTGCAAATACATGA 1035 0.4222 MEEVEMANKVAIESCHRVLNLLSQPQDQFQSRKLMMETGEAVLGFKKVVSLLSNSLGYARVKKFKKLQTPFPRSILLDNPICRTNHPSKNPQFLQSIFTENSSQELGSNVKNSLYLANPSFEFSSNGKAPLQLAQQAATIPCHFLQQQQQHQQRLLLQHQQLKHQAEMVYKRSNSGINLNFDNSSCTPTMSSNRSFISSLSMDGSLANLDGSAFNVIGASQSLDQNSQHKIKCSARDDANAKCASSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHSRIPVQPANT* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01766 344 Pfam Plant zinc cluster domain 231 274 IPR018872 -
Pte18g01766 344 Coils Coil 145 165 - -
Pte18g01766 344 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01766 344 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01766 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 339 IPR044810 GO:0003700
Pte18g01766 344 FunFam WRKY transcription factor 65 260 337 - -
Pte18g01766 344 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01766 344 Gene3D WRKY domain 262 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01766 344 SUPERFAMILY WRKY DNA-binding domain 274 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01766 Pte-Chr18 28903175 28906037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01766 1 345 WRKY Transcription Factor Family AT2G30590 54.286 1.08e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g01766 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01766 - - qsa:O6P43_006946 483.796