Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01763 ATGATTGGAACGAGAAAGTTGGGTGAGAAGTTCTGGGTGAAGGATGAAGATAAGGCTATGGTGGAAACTGTGGTGGGTTCTGAAGCATGCGGGTATTTGATTTCCACTGCTTCAAATAATGTTCTAGGTGATGTAACTACATCTGGTGGCGATTTGGGTGTTCAGAAGGCGTTGTCACAGCTTGTTGAACGTTCTAGTTGGAACTACTCTATCTTCTGGCAGGTTGTGGGGTTGAAATCGGGTGGATCTGCGTTGGTTTGGGGTGATGGTCATTGTAGAGACCCGGGTATCGCTGAAAATGGAGGTGGGAGTTCAAAAGGAGAAAGTGAAATTGCAGGAGCTGATAAGAGAGATCAAATGAAAAGGCAGGTTCTTCAAAAGCTTCATGCTTGTTTTAATGGGTCTGGAGAGGATAAATATATTAAAAGGCTGGATAGGGTTTCAGATGTGGAGATGTTTTACTTAACTTCCATGTATTATGCATTTCGATTGGAGTCAGCATATGGTCCTGGTAACTCTTTTAGTTCTGGTCATATCATTTGGGCTGTAGATATGGTTAATTCTTCAAATCAATATGAATCGAGAGCGTTTCTAGGACAATTGGCGGGTTTCCAGACGGTGGTTTTCGTGCCTCTAAAAGCTGGAGTAGTGGAGCTTGGTTCAGTAAGGAGGATACCAGAAGAACAGGATATTGTGGATAGGGTGAAAATGATATTCAGGGAATCGGATCCAGGCGAGGCAAGGGTGTTCCCCAAGATTTTTGGGCATGAATTGAGTTTGGGTGATGCAAAGTCTCATTCAATGACTATAAGTTTCTCCCCTAAGGTGGAAGATGACCCTGCAGATTCATATGAAGCATCAGCATTGAGTGCAAATCATTTTCATGGGAATTCTTCTAACGGACTACAAGGGAACCGTCATGATCCGACTATTTTTCCACGGTCTAATCAGATAATTGTTGGTGGTTTGGATGCTCCATCGTCCATTTCGTATTTTGAGATGGCTAAGGATGAGTCATCCGCTGTGCCTGATGATCGGAAACCAAGGAAAAGGGGGAGAAAACCTGCCAACGGTAGAGAGGAGCCTTTGAATCATGTGGAAGCCGAGCGACAGAGGCGTGAGAAGCTTAATCAGAGGTTCTATGCTTTACGAGCTGTTGTTCCCAACATCTCTAAAATGGATAAGGCATCCTTGCTTGGTGATGCCATTTCATATATTACTGATCTACAGATGAAAATAAAGGTCCTGGAGGCTGAAAGAGAAATGGTTACCGACAACCATGATAAGCCTTCACTGTTGCCCGATTTGGATTTCCAGGTAAGAGAAGATGATGCAGTTGTGAGAATGAGTTGTCCTTTGGATACTCATCCTGTTTCAAAAGTCATTAGAACTTTGAAAGAACATCAGATTTTAGCTCAAGATTCCAGTGTAGCCACAGCTGATGACAAAATAATTCATACATTCTCCATTCAAACCAAAGATGGTGATGCTGAGCAGTTGAAGGAGAAACTTGTCTCTGCCCTCTCCAAATAA 1533 0.4299 MIGTRKLGEKFWVKDEDKAMVETVVGSEACGYLISTASNNVLGDVTTSGGDLGVQKALSQLVERSSWNYSIFWQVVGLKSGGSALVWGDGHCRDPGIAENGGGSSKGESEIAGADKRDQMKRQVLQKLHACFNGSGEDKYIKRLDRVSDVEMFYLTSMYYAFRLESAYGPGNSFSSGHIIWAVDMVNSSNQYESRAFLGQLAGFQTVVFVPLKAGVVELGSVRRIPEEQDIVDRVKMIFRESDPGEARVFPKIFGHELSLGDAKSHSMTISFSPKVEDDPADSYEASALSANHFHGNSSNGLQGNRHDPTIFPRSNQIIVGGLDAPSSISYFEMAKDESSAVPDDRKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYITDLQMKIKVLEAEREMVTDNHDKPSLLPDLDFQVREDDAVVRMSCPLDTHPVSKVIRTLKEHQILAQDSSVATADDKIIHTFSIQTKDGDAEQLKEKLVSALSK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01763 510 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 363 425 IPR036638 GO:0046983
Pte18g01763 510 Gene3D - 353 426 IPR036638 GO:0046983
Pte18g01763 510 MobiDBLite consensus disorder prediction 338 371 - -
Pte18g01763 510 FunFam Transcription factor bHLH13 353 427 - -
Pte18g01763 510 CDD bHLH_AtAIB_like 357 421 - -
Pte18g01763 510 SMART finulus 366 415 IPR011598 GO:0046983
Pte18g01763 510 MobiDBLite consensus disorder prediction 336 371 - -
Pte18g01763 510 PANTHER MYC 25 507 IPR045084 GO:0003700|GO:0006355
Pte18g01763 510 Pfam Helix-loop-helix DNA-binding domain 364 410 IPR011598 GO:0046983
Pte18g01763 510 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 239 IPR025610 -
Pte18g01763 510 Coils Coil 406 426 - -
Pte18g01763 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 360 409 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01763 Pte-Chr18 28890649 28893026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01763 7 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.767 7.59e-163 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte18g01763 bHLH-MYC_N 9.2e-44 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01763 - - qsu:111999675 639.032