Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01756 ATGACCGGGTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTCTTTGCGCCTTACTTTTGTCATGAACAGGGTGCTACTCACTTTGCAGCCATTCATAAGGTTTTTGGTGCAAGCAATGTATCCAAGCTTCTCTCTCACCTCCCTGTGAGTGATAGGTGTGAAGCTGCTCTTACCATCTCTTACGAAGCTCAAGCAAGACTCCAAGATCCAGTATATGGCTGTGTTTCTCACATCTTTGCGCTTCAACAACAGGTGGTTAATCTACAAGCCCAGCTAACTCTTCTGAGGGAACAAGCAGGTCAAAGCCTTCTCCACAACTCTGTTACTCCAAACCCTAATGAAAAATACCCTGGGAAATCCCCTACTCAGCTACAAGATCTACATAATTGGTTTCAATCACCAAATTCCAACTTGATGGAGCCACAGTTTCCTCCCAACTTGTCTAATAATAATACGACAGTGCCATACTATGAGAGCGGTAACGTGGCCGTAAACCCAGTAGGGAACTGTGAAAGTTCAGGGACAATGGAACAAAATGTCTTGTTCTCTAGCTTTGAAGACAGTTCTCCTTCCATGTTCTCTTACCACATGCTAAAACAAAACAGGCACTGGGCCTACCATGAATTCGAAGTAGATGACCTCCAATCTGTGCCTTATGGCTACATTCTCCGTTGA 702 0.4459 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLSHLPVSDRCEAALTISYEAQARLQDPVYGCVSHIFALQQQVVNLQAQLTLLREQAGQSLLHNSVTPNPNEKYPGKSPTQLQDLHNWFQSPNSNLMEPQFPPNLSNNNTTVPYYESGNVAVNPVGNCESSGTMEQNVLFSSFEDSSPSMFSYHMLKQNRHWAYHEFEVDDLQSVPYGYILR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01756 233 Coils Coil 87 107 - -
Pte18g01756 233 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Pte18g01756 233 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Pte18g01756 233 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01756 Pte-Chr18 28847759 28848578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01756 7 231 AS2 family AT3G58190 51.092 3.48e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g01756 LOB 3.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01756 K13945 - vvi:100266975 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01756 18 28847759 28848578 Pte18g01756 18 28847759 28848578 RCT