Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01740 ATGGATTCTGCAAAGAGTTGGTTTCAAAAGTTTCAGCCTAGGGATAAAATGAGATCGTATACTAGGAGAATGGATAGCAATGATGATGACCCTAATTCACAAGTCGATGATGAGGAGCTTTCCAACATCACCAAGCAGAAAGTTGCAGCAGCCAAACAGTACATAGAGAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAAAGAAGGGAACGTCGGATCATTTTGGAAAAGAAGTTAGCAGAAGCAGATGTCTCTGAAGAAGATCAAAACAACCTTCTCAAATTTTTGGAGAAAAAAGAAACTGAATATATGCGACTACAAAGGCATAAGATGGGTGTCGATGATTTCGAGTTACTGACCATGATAGGCAAAGGCGCATTTGGAGAGGTTAGGGTCTGCAGAGAAAAGGTAACAGGCCATGTGTATGCGATGAAAAAGCTTAGAAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTGAAAGCTGAAAGAAATTTATTGGCTGAAGTTGACAGTAATTGCATCGTTAAACTATACTGTTCTTTCCAAGATAACGAGTACCTTTATCTTATTATGGAATATCTACCTGGTGGAGATATGATGACTTTGCTTATGAGAATGGACACCTTAACTGAAGATGAAGCTAGGTTTTATGTAGGAGAGACAGTTTTGGCGATCGAATCTATCCACAAACACAATTACATCCATAGGGATATAAAGCCTGATAATTTGTTACTCGATAAATATGGACACTTGAGACTTTCAGATTTTGGATTGTGTAAACCATTAGATTGCAGTAAACTTGAAGATCAGGATTTTTCTGTTGGTCAAAATACTAATGGATCCACACAAAATGATGGACGATCTATAACTCCCAAGCGTTCTCAACAAGAACAACTTCAACATTGGCAAAAGAATCGAAGGACGCTAGCTTATTCCACAGTTGGCACGCCAGACTATATTGCTCCCGAAGTTCTGTTAAAAAGAGGCTACGGAATGGAATGTGATTGGTGGTCGCTTGGTGCAATTATGTTCGAAATGCTGGTGGGTTATCCACCATTTTATTCCGATGATCCAATGTCAACATGTAGAAAGATAGTAAATTGGAGAACACACCTGAAATTTCCTGAAGAAGCAAGGATATCTCCTGAGGCTAAGGATCTTATCAGTAAACTCTTGTGTAATGTTGATGATAGGTTGGGATCAAAGGGCGCCGATGAAATAAAGGCTCATCCTTGGTTCAAAGTTGTTGAATGGAATAAACTATATCATATGGAAGCTGCGTTTATCCCTGAGGTCAATGATGAGTTAGATACACAAAACTTTGAGAAGTTTGACGATGAGCCTGACCACCTGACTCACAGTACATCCAAATCTGGGCCATGGAGAAAGATGCTGTCATCGAAGGATGTAAATTTTGTGGGATATACGTATAAGAATTTTGAGATTGTCAATGATTACCAAGTTCCTGGAATGGCTGAGCTGAAGAAGAAAAATGCCAAACCGAGGAGGCCATCCATCAAGTCACTATTTGAAAATGAGACGGAGGGATCAGAGGCATCGGAGGCTTCAGATTTGGGTGATAATCATCATTCTGATCAAGACTGTTTCTCAGACTCTTTGCCTCCACACTCTTAA 1644 0.3984 MDSAKSWFQKFQPRDKMRSYTRRMDSNDDDPNSQVDDEELSNITKQKVAAAKQYIENHYKEQMKNLQERRERRIILEKKLAEADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKVTGHVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDNEYLYLIMEYLPGGDMMTLLMRMDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSKLEDQDFSVGQNTNGSTQNDGRSITPKRSQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKRGYGMECDWWSLGAIMFEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEARISPEAKDLISKLLCNVDDRLGSKGADEIKAHPWFKVVEWNKLYHMEAAFIPEVNDELDTQNFEKFDDEPDHLTHSTSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKNAKPRRPSIKSLFENETEGSEASEASDLGDNHHSDQDCFSDSLPPHS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01740 547 CDD STKc_NDR_like 115 481 - -
Pte18g01740 547 CDD MobB_NDR_LATS-like 51 112 - -
Pte18g01740 547 Pfam Protein kinase C terminal domain 435 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte18g01740 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pte18g01740 547 MobiDBLite consensus disorder prediction 500 547 - -
Pte18g01740 547 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Pte18g01740 547 Pfam Protein kinase domain 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01740 547 MobiDBLite consensus disorder prediction 9 30 - -
Pte18g01740 547 SUPERFAMILY Protein kinase-like (PK-like) 90 459 IPR011009 -
Pte18g01740 547 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Pte18g01740 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 469 - -
Pte18g01740 547 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Pte18g01740 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte18g01740 547 MobiDBLite consensus disorder prediction 277 297 - -
Pte18g01740 547 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01740 547 MobiDBLite consensus disorder prediction 1 42 - -
Pte18g01740 547 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Pte18g01740 547 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Pte18g01740 547 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01740 547 Gene3D Transferase(Phosphotransferase) domain 1 203 433 - -
Pte18g01740 547 MobiDBLite consensus disorder prediction 525 539 - -
Pte18g01740 547 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01740 Pte-Chr18 28740511 28745379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01740 1 513 AGC Kinase Gene Family AT2G20470 77.692 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte18g01740 Pkinase 4.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01740 K08790 - qsa:O6P43_006882 929.858