Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01733 ATGACCTGTCTCAGCTCTGGTCAGCAATTGAGAACTGCAGATGAAATGATCCCTTCTTCCGAATCTCTTGCAACCAAGGATTTTGCTGTTAGTGGATGTTTTTCTCAGTCTGGAGAGACTTGCAAGAAGCCTAACATTGGCAGCATGGAAGAAGCTGAATCGTCTTTACGTGAAAGTGGATTCTTGAACTACGAGGAAGCGAGAGCACTATTAGGAAGATATGAGTATCAGAAAGGAAATATAGAAGCTGCTTTACATGTTTTTGAAGGAATAGATATCGGAGCTATTACTCCTAAAATGAAAATAACGCTTGCAAAAAGAGGAGTACGTGGTAAGAGGCCATCCAACAACTATGCTGCCCCACCAATGTCTATTCATGCCGTTAGTCTACTTTTGGAGGCAATTTTTCTAAAATCAAAATCACTGCAGCTTCTTGGAAGGTTTAAAGATGCTGCTCATTCTTGTAAAGTTATTCTGGACATAGTTGAATCTTCATTGCCAGAAGGGTTGCCAGAAAACTTCAGTGTTGAGTGTAAATTACAGGAGATTTTGATCAAAGTTGTGGAGTTGCTTCCGGAACTATGGAAACTTGCTGATTGTCCATATGAAGCTAGTATGTCATATCGGCGAGTGCTCCTTCATCGCTGGAATCTTGATATAGAGGTTACAGCAAATATACAGAAAGAGTTTGCAGTTTTTCTTCTGTACAGTGGAGGTGAAGCAAGTCCCCCAAATCTTCGATCCCAATTGGACAGTTTTTTTGTTCCTAGGAACAACATAGAAGAAGCTATTCTTCTTTTAATGATACTTGTAAGAAAAATGTCTATGAAGAAAATCAATTGGGATCCAGCAATCATGGATCACCTGTCATATGCTCTGTCAATTGCAGGGGATCTACACAGTCTAGCCAATCAATTTGAGCAATTACTTCCTGGAGTTATTGACCGAAAGGAAATGTTCCACTTGCTTGCACTTTGCTACTATGGAGCAGGTGAGGACTTGGTAGCATTGAATCTTGAACGAAAATTGTTGAGCAGCAGAGAGGATCCAAACTGTGTTCCAGCTTTGTTGATGGCATCGAAGATTTGCGGGGAGAATCCTAATCTTTCACAAGAAGGTGTAAACTTTGCCCGCAGAGCCCTCAAGAATTTAGAGGGGAAATGTGATCAGCTAGAAAGTCTTTCAAGTTTCTTACTTGGTATTTCCCTTTCAGCAACTTCTGAGACTTGTGTTAGTGATTCTGAGAGACTGAAGCGACAATCTGAAGCTCTGCATGCTCTTGAGACTGCCACCAGAATGACAAAACGGAAAGATTCCATAATGCTTTACCATCTCGGCCTAGAATATTCTGAACAAAGAAAGTTAGATAATGCTCTTTATTATGCAAAGTGCCTGCTAAAAGTGGAAGCCGGCTCTAATATTAAGGGGTGGGTATTATTAGCCCGCATATTATCAGCTCAAAGACGGTTTTTAGATGCTGAAACTATTGTTAATGCTGCTTTGGATCAGACTGGCAAATGGGATCAAGCGGACTTATTGCGAACAAAAGCTAAACTTCAACTAGCACAGAATCAGTTAAGGAGTGGTATAGAAACGTATACTCAACTTCTTGCTCTACTTCAAGTTCAGAATAAAACTTTTGCTGCTGGAAAGAAGCTTAATAAGGAGAGGAGAGACCAGATTGGCAGTTTGGAACTGGAAATTTGGCATGATCTTGCTTATATTTACATAGGATTATCACAGTGGCAGGATGCAGAGATTTGCGTATCCAAATCTAAATCCATCAAGTCGCCCTTGGCTTTTAGATGTCATGTTACTGGTGCACTCTATGAAGCAAAGGGTCTTCATAAAGAGGCTCTAAGAGCTTTTACTGCTGCGTTGGACATTGATCCCGGCCATGTCCCAAGCTTGGTCTCAACTGCTGTAGCTCTTAGGCGACTTGGAAGCCAAAGTCATGACATCATTAGAAGCTTTCTGATGGATGCACTCCGGCGTGACAGAAGGAACGTATCTGCTTGGTACAACCTTGGCCTTACATACAAGGATCAGGGCTCACCATCATCTTTGGTCGAAGCCACTGAATGTTTTGAGACTGCAACTTTCCTTCAAGAAACTGCACCTGTTGAACCATTCAGATAA 2139 0.4142 MTCLSSGQQLRTADEMIPSSESLATKDFAVSGCFSQSGETCKKPNIGSMEEAESSLRESGFLNYEEARALLGRYEYQKGNIEAALHVFEGIDIGAITPKMKITLAKRGVRGKRPSNNYAAPPMSIHAVSLLLEAIFLKSKSLQLLGRFKDAAHSCKVILDIVESSLPEGLPENFSVECKLQEILIKVVELLPELWKLADCPYEASMSYRRVLLHRWNLDIEVTANIQKEFAVFLLYSGGEASPPNLRSQLDSFFVPRNNIEEAILLLMILVRKMSMKKINWDPAIMDHLSYALSIAGDLHSLANQFEQLLPGVIDRKEMFHLLALCYYGAGEDLVALNLERKLLSSREDPNCVPALLMASKICGENPNLSQEGVNFARRALKNLEGKCDQLESLSSFLLGISLSATSETCVSDSERLKRQSEALHALETATRMTKRKDSIMLYHLGLEYSEQRKLDNALYYAKCLLKVEAGSNIKGWVLLARILSAQRRFLDAETIVNAALDQTGKWDQADLLRTKAKLQLAQNQLRSGIETYTQLLALLQVQNKTFAAGKKLNKERRDQIGSLELEIWHDLAYIYIGLSQWQDAEICVSKSKSIKSPLAFRCHVTGALYEAKGLHKEALRAFTAALDIDPGHVPSLVSTAVALRRLGSQSHDIIRSFLMDALRRDRRNVSAWYNLGLTYKDQGSPSSLVEATECFETATFLQETAPVEPFR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01733 712 ProSiteProfiles TPR repeat profile. 600 633 IPR019734 GO:0005515
Pte18g01733 712 PANTHER PROTEIN NPG1 1 712 IPR043376 -
Pte18g01733 712 SMART tpr_5 474 507 IPR019734 GO:0005515
Pte18g01733 712 SMART tpr_5 566 599 IPR019734 GO:0005515
Pte18g01733 712 SMART tpr_5 439 472 IPR019734 GO:0005515
Pte18g01733 712 SMART tpr_5 600 633 IPR019734 GO:0005515
Pte18g01733 712 SMART tpr_5 670 706 IPR019734 GO:0005515
Pte18g01733 712 SMART tpr_5 510 543 IPR019734 GO:0005515
Pte18g01733 712 SUPERFAMILY TPR-like 508 685 IPR011990 GO:0005515
Pte18g01733 712 Gene3D Tetratricopeptide repeat domain 553 708 IPR011990 GO:0005515
Pte18g01733 712 Gene3D Tetratricopeptide repeat domain 257 552 IPR011990 GO:0005515
Pte18g01733 712 Coils Coil 374 394 - -
Pte18g01733 712 SUPERFAMILY TPR-like 417 539 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01733 Pte-Chr18 28660381 28665696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01733 1 713 Calmodulin-binding Proteins AT4G28600 58.069 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01733 K21843 - qsa:O6P43_006870 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01733 18 28660381 28665696 Pte18g01733 18 28660381 28665696 RCT