Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01729 ATGGCGACCATTGAAAAGGGTCCAATCCTTCTTTTGTGCATTTCCATGCTTTTCTTGCTTCCACCAAAGATCATGTCATCATCAAGAACAGAACTAGAGGCTCTCATCAAATGGAAGAACAGCCTTGTTTCTCCTTTTCCTTCCCCACTCAAATCATGGTCTTTAACCAACCTCAATAACCTTTGCAAGTGGAATGGTATCGTTTGTGATAGAAGCAAGACAACAGTTTCAGGAATAAACCTTTCTGATGCCAACCTCAATGGCACTCTCACCTTCTTTCCCTTTGCTTCTTTAACCAATATCACCTACTTGAATCTCAATGACAACAATTTCAATGGCACAATACCATCAGCAATTGGTAGTCTTACCAGGCTCATTGTCTTGGACTTGGGAAACAACTACTTTCAAGGAACATTACCTCAAGAGCTCGGTCAGCTTGGTGAGCTTCAATATCTTAGTCTTTCAAACAATAATCTCAACGGTACCATTCCCTATCAACTCACCAATCTCAACAAGGTACGGCATATAGACCTTGGCTTTAATTTCTTTCAATCCTCTCCTCTCTGGTCCAAATTTTCAGGCATGTTTCAGCTACGTTATCTCAGTTTGAGTAATAATGGCTTTAATTCTGAATTTCCCAGTTTCATATTAGGTTGCCAGAACTTGACATTTCTGGACTTGTCACAAAATCGTATGACTGGCTTAATACCAGAGTCACTGTATCACAATCTGAGAAAGCTTGAATACCTTAATCTCACCAGTAATATGTTTGAAGGGACTTTTTCATCAAACTTGTCCAAACTTTCTAATCTCAGAGAAATTCGGCTGGCAAACAACAAGTTTAGTGGTCCTATCCCTAGGGAGTTTGGTTTTATATCTGGACTTCAAGTTCTTGAATTGTACAATAATTCCTTCCATGGGGAAATTCCTTCCACTCTAGGAGAACTCAAGGAGCTTCAGTCCCTAGATCTGCATATGAACTTCTTGAATTCTTCAATCCCATCTAAGCTTGGTTTTTGTGCAAACCTCACCTACCTTACTTTAGCGCTGAATAATCTCACTGGTGTTTTGCCTTTATCATTATCAAAACTAAACAAGATTGCAGATCTGGGGTTGTCAGATAATTCTTTCTCTGGAGAAATCTCACCCTTGTTGATCTCAAATTGGAGAGAGTTGGTTTCTTTGCAACTTCAAAATAACAAATTCACAGGACCTGTACCTGCAGAAATTGGACTTCTAGAAAAACTTCAGTACCTTTTCTTGTACAATAATCATTTCTCAGGTTCCATTCCCAAGGAGATTGGAAACTTGAAGGAAATTGTAAGCTTAGATCTTTCAGTAAACCAGCTCTCTGGTTCAATCCCTCCAACCATTTGTAGCCTGAAGAATATGGAGAGCATACAACTTTTCTCCAACAATCTCGCTGGAACCATTCCAAGAGAGATAGGAAACTTGATTTCCCTTGTTAACTTTGACGTGAACACCAACCATTTGCAAGGGCAGTTACCGCAAACTATTTCGCAACTAACCAATCTACAGTCATTTTCTGTGTTCACCAACAATTTCTCAGGAAGTATTCCTGTAGAATTTGGAAAGCATAGTCCATCTCTGAGCTACATTAGCTTCGCAAATAACAGTTTCTCCGGACAACTGCCTCCTAATCTTTGTAATGGTTTTGCTCTTGAAGATTTCACAGTCAATAACAACAAGTTCTCTGGACCGTTGCCAAAATGCTTGAGAAATTGTTCAGGCTTGGTTCGGGTTCGTCTTGATGGAAACCAATTCACTGGAAACATCACCGATTCATTTGGAGTTCACCCGAGTCTTGCATTTATTACTCTGAGTGGCAATCAATTTGTTGGTGAGCTCTCTCCAGAGTGGGGTCAATGTGTAAATTTGACCAACTTGCAGATGGACAGGAACAAACTCTCTGGAAGAATCCCATCGGAACTTGGTTTATTGACCCAAATGCAAGTTCTGACTCTTGACTCCAATGAGTTCACAGGCAACGTTCCATCTGAACTGGGGAAAATAGGCCTACTATACAAGCTTAACCTAAGCAATAATCATTTGACTGGAGAGATCCCTCAGAATCTTGGAAAATTATCTATGCTCGAGTATCTTGATTTGTCAGACAATGATTTGAGAGGATATATACCAAAAGAGCTAAGCAATTGTGACCACTTAGTGAGCTTAAACTTAAGCTACAACAACATATCCGGAGAGATTCCATCAGAGCTTGGCAACCTGTTTTCATTGAGATATACGTTGGACCTCAGCAGCAACTCACTCTCAGGACTAATTCCTTCAAACTTAGAGAAGCTCTTATCGCTAGAGATACTCAATCTCTCACATAACCGTCTATCTGGGAAAATCCCTCAAACACTATCCAGTATGATTAGTCTTCAAAGCATTGATCTTTCGTATAACAACTTGTCAGGTCCTATTCCAGAAAGTCCTATTTTCCATCAGCAATCTGCTGGAACTTATGTTGGGAACTCAGGATTGTGTGGAGATGCAAAAGGGTTACGCCTTTGTCGATCCTTGGATTCTTCAGGTAAGTCAAAAGGGTACAAGAAGAAAGTTCTACTTGGCGTTCTTATACCAGTTGGTGGGGTGCTCGTTATTTCAGTACTAGTTCTTACACTTCTAGCAGTTCATGTGCGAGTGAAGCACATTGACGAGGAAACAAAAGGAAATGAGATGTGTTTCAACTTAGAGTCAACAATATGGGACAGAGAAGGGAGATTTACATTTGGTGAAATTGTAAAGGCCACTGATGACTTCAATGAGAAGTACTGCATAGGAAAAGGAGGATCCGGAAGTGTGTACAAAGCTGTGTTACCAACAGGTCAAATTGTTGCAGTGAAAAAGCTCAACATGCCAGACTCTGAAGTTTCATCTGCCAATCGACTTAGCTTTCACAACGAGATAAAAGCTCTTACAAGTGTTAGGCACCGAAATATTGTAAAGCTTCACGGGTTCTGTTCAAGAAGACTATGTATGTATATAGTCTATGAATATGTAGAGAGAGGTAGCTTAGCGAAAGTATTGTATGGATTTGAAGGTAAGCATGATCTGAAATGGGAAACAAGGGTCAAAATCGTACAGGGAATAGCTCATGCACTTGCTTACTTGCATCATGACTGTTCTCCAGCTGTTGTGCACAGAGATGTTTCTTTGAATAACATTTTGCTTGAGTTAGACTATGAACCACGGCTATCGGATTTTGGCACGGCAAAACTACTGAACCCCGATTCAACTAATTGGACCTCAGTTGCAGGCTCTTATGGATACATGGCTCCAGAGTTTGCACAAACAATGAGGATCACCGAAAAGTGTGACGTTTACAGCTTCGGTGTGGTGGCACTAGAAATCATGATGGGAAAGCATCCCGGAGACCTACTAGTTTCTCTATCTTCAATAAAGTCTCTGACATCACCCTTGGACGATCAAGATATGTTTTTGAAGGATGTAATTGGTCTTGAAGCTCCTAGAGGCGAACTAACTAATACAGTTGTTTCCGTTGTGACTATGGCCTTGGCATGCACGCGTACCAGTCCGGAGACAAGACCCACAATGCGTCATGTTGCACAAGAACTCTCATCTAGAATGCATGTTGTCTCCGCATCCTTCGACAAGATTAAGATAAGCCAATTAATCAGATTGTAA 3672 0.4066 MATIEKGPILLLCISMLFLLPPKIMSSSRTELEALIKWKNSLVSPFPSPLKSWSLTNLNNLCKWNGIVCDRSKTTVSGINLSDANLNGTLTFFPFASLTNITYLNLNDNNFNGTIPSAIGSLTRLIVLDLGNNYFQGTLPQELGQLGELQYLSLSNNNLNGTIPYQLTNLNKVRHIDLGFNFFQSSPLWSKFSGMFQLRYLSLSNNGFNSEFPSFILGCQNLTFLDLSQNRMTGLIPESLYHNLRKLEYLNLTSNMFEGTFSSNLSKLSNLREIRLANNKFSGPIPREFGFISGLQVLELYNNSFHGEIPSTLGELKELQSLDLHMNFLNSSIPSKLGFCANLTYLTLALNNLTGVLPLSLSKLNKIADLGLSDNSFSGEISPLLISNWRELVSLQLQNNKFTGPVPAEIGLLEKLQYLFLYNNHFSGSIPKEIGNLKEIVSLDLSVNQLSGSIPPTICSLKNMESIQLFSNNLAGTIPREIGNLISLVNFDVNTNHLQGQLPQTISQLTNLQSFSVFTNNFSGSIPVEFGKHSPSLSYISFANNSFSGQLPPNLCNGFALEDFTVNNNKFSGPLPKCLRNCSGLVRVRLDGNQFTGNITDSFGVHPSLAFITLSGNQFVGELSPEWGQCVNLTNLQMDRNKLSGRIPSELGLLTQMQVLTLDSNEFTGNVPSELGKIGLLYKLNLSNNHLTGEIPQNLGKLSMLEYLDLSDNDLRGYIPKELSNCDHLVSLNLSYNNISGEIPSELGNLFSLRYTLDLSSNSLSGLIPSNLEKLLSLEILNLSHNRLSGKIPQTLSSMISLQSIDLSYNNLSGPIPESPIFHQQSAGTYVGNSGLCGDAKGLRLCRSLDSSGKSKGYKKKVLLGVLIPVGGVLVISVLVLTLLAVHVRVKHIDEETKGNEMCFNLESTIWDREGRFTFGEIVKATDDFNEKYCIGKGGSGSVYKAVLPTGQIVAVKKLNMPDSEVSSANRLSFHNEIKALTSVRHRNIVKLHGFCSRRLCMYIVYEYVERGSLAKVLYGFEGKHDLKWETRVKIVQGIAHALAYLHHDCSPAVVHRDVSLNNILLELDYEPRLSDFGTAKLLNPDSTNWTSVAGSYGYMAPEFAQTMRITEKCDVYSFGVVALEIMMGKHPGDLLVSLSSIKSLTSPLDDQDMFLKDVIGLEAPRGELTNTVVSVVTMALACTRTSPETRPTMRHVAQELSSRMHVVSASFDKIKISQLIRL* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01729 1223 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 458 1202 - -
Pte18g01729 1223 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 534 850 - -
Pte18g01729 1223 FunFam MDIS1-interacting receptor like kinase 2 193 384 - -
Pte18g01729 1223 Gene3D Phosphorylase Kinase; domain 1 889 1008 - -
Pte18g01729 1223 Pfam Protein kinase domain 931 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01729 1223 SUPERFAMILY RNI-like 79 403 - -
Pte18g01729 1223 FunFam MDIS1-interacting receptor like kinase 2 1009 1207 - -
Pte18g01729 1223 Gene3D Ribonuclease Inhibitor 289 385 IPR032675 -
Pte18g01729 1223 Gene3D Ribonuclease Inhibitor 386 504 IPR032675 -
Pte18g01729 1223 ProSiteProfiles Leucine-rich repeat profile. 777 799 IPR001611 GO:0005515
Pte18g01729 1223 SMART LRR_typ_2 461 485 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 195 219 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 413 437 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 702 726 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 220 242 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 775 799 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 244 263 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 146 170 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 98 122 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 268 291 IPR003591 -
Pte18g01729 1223 SMART LRR_typ_2 316 340 IPR003591 -
Pte18g01729 1223 FunFam Leucine-rich repeat receptor protein kinase MSP1 892 1008 - -
Pte18g01729 1223 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Pte18g01729 1223 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Pte18g01729 1223 Pfam Leucine rich repeat 681 739 IPR001611 GO:0005515
Pte18g01729 1223 Pfam Leucine rich repeat 756 812 IPR001611 GO:0005515
Pte18g01729 1223 SUPERFAMILY RNI-like 533 818 - -
Pte18g01729 1223 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 404 504 - -
Pte18g01729 1223 SUPERFAMILY L domain-like 340 527 - -
Pte18g01729 1223 Gene3D Transferase(Phosphotransferase) domain 1 1009 1217 - -
Pte18g01729 1223 ProSitePatterns Protein kinases ATP-binding region signature. 935 958 IPR017441 GO:0005524
Pte18g01729 1223 Gene3D Ribonuclease Inhibitor 190 288 IPR032675 -
Pte18g01729 1223 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Pte18g01729 1223 SUPERFAMILY Protein kinase-like (PK-like) 911 1201 IPR011009 -
Pte18g01729 1223 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1054 1066 IPR008266 GO:0004672|GO:0006468
Pte18g01729 1223 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Pte18g01729 1223 ProSiteProfiles Protein kinase domain profile. 929 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01729 1223 FunFam Nuclear pore complex protein NUP107 28 188 - -
Pte18g01729 1223 PRINTS Leucine-rich repeat signature 222 235 - -
Pte18g01729 1223 PRINTS Leucine-rich repeat signature 775 788 - -
Pte18g01729 1223 Gene3D Ribonuclease Inhibitor 505 847 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01729 Pte-Chr18 28619453 28623242 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01729 364 817 Receptor kinase-like Gene Family AT4G08850 32.636 6.39e-66 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte18g01729 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01729 - - qsa:O6P43_006859 1543.87