Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01724 ATGTGCTGGTTCTTGTTATGTTACTGTTGCATTGCTTGTCTCACCTTTTGTTTCGCAGTTGAAGTGAATGAAGAAGTGTCTGCATTACTTTCCATAAAATCCAATCTTAACAATTCCTTTAACAGCTTAAGGGATTGGAGTTTGGTGGACAAATCATCAGAGAAAAATGCAGCACATTGTAACTGGACTGGTGTCGGATGCAATTCTGTTGGAGCTGTGGAGAAGCTTGATCTCTCCCACATGAATCTCAGTGGCCATATATCGGATGAGATACACAGGCTGAAACATCTCACGTCATTGAACTTGTGCTGCAATGATTTCTCATCATCATTACCTAGTTCCGTAGCCAACCTCACAGCATTGCAGAACCTTGATGTCAGTCAGAATTATTTTACTGGAGACTTCCCAATTGGCTTCGGAAGGGCCTCTGCTTTGAGAATATTAAACGCATCAAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACATCGGCAATGCAACTTCCTTGGAGTTGCTGGATCTCAGGGGCAGTTTCTTTCAAGGCTCAATTCCGAAAGTATTCGGGAGTCTACAGAAGCTGAAGTTCCTGGGACTTTCAGGAAATAATCTCACCGGGGAAATCCCAATAGAGCTGGGCCAGCTTTCATCGCTAGAGAGCCTAATTCTTGGGTACAATGTTTTTGAAGGTAGGATTCCAACAGAATTTGGAAATCTCACCAATCTCAAGTATCTTGATTTGGCTGTAGGTAATCTTGATGGTGAAATCCCAGCTGACATAGGGAGGCTCCAGCTTCTTGAGACAATTTTCTTGTACAAAAACAATATCCGAGGTAGAATACCAGCAGCAATTGGCAACATGACATCATTGCTTTTGCTGGATCTCTCTGATAACATATTGTCAGGACATATTCCAATTGAGATAACTCGGCTGAAAAATCTGCAGCTGCTGAATTTGATGTGCAACTGGATAACCGGTTCCATTCCTCCTGGATTTGAAAATTTGAATCGATTGGAGGTGCTTGAGCTGTGGAACAATTCAATGTCAGGTCCATTGCCTGTTGATCTTGGGAAAAATTCACCATTGCAGTGGTTGGACATATCATCCAATTCATTCTCTGGTGAAATTCCCCAAACACTCTGCAACAAGAATAATCTGACCAAACTCATCCTTTTCAACAATGCCTTCTCAGGTTCCATTCCAGCTACTTTATCGACTTGTGTTTCACTTATTCGAGTAAGAATGCAGAACAATCTTCTTTCTGGTACAATTCCACTGGGACTCGGCAAACTTAGCAAGCTTCAGAGGTTAGAGTTGGCCAATAATAGTCTAACCGGTCAAATTCCAGACGATATTACCTCTTCCACGTCGCTTTCTTTCATTGATCTTTCCAGAAACAACTTGAATTATTTTCTTCCTTCAACCATTCTTGCGATTCCAAGTTTACAATCCTTCATTTTATCAAACAATAACTTGATGGGTAAAATCCCAGATCAATTCCAGGAATGTCCTTCGCTTTCTATACTTGATCTCTCATCCAACCATTTGTCTGGAAGCATTCCAGCAAGTATTGCTTCATGTCAGAAGTTGGTCAATTTGAACTTAAAGAACAACTTACTGACAGGAGAAATTCCAACAGCCATTGCAATGATGCCGACGTTGGCAGAGCTCGATTTATCCAACAATTCTCTTACTGGTGGGATACCTCAAACATTGGGTCTCGCACCAGCCTTAGAAGCACTCAACGTCTCCTATAACAAGCTGGAGGGTCAAGTTCCAGCAAATGGCCTGCTGAGGACAATAAACCCAACCGATCTTGTAGGCAATGCTGCTCTTTGTGGTGGGGTCCTCCCACCATGTGAGCAGAACCATGCTGTCACAGCGAGCCATGGAAGCTCAAAGCCCATCCTCACTGGATGGATCACCGGAATAACATCGCTACTAGCAATTGGAATTGCGATTTTGGTAGTTCGATCTCTTTACCAAAAATGGTATACTCATGGAGGTTTCTTCTTAGGAAGATTTGGAAAGCACAGTGGAGAGTGGCCATGGAGATTAATGGCATTCCAGAGGCTTAGTTTTACTAGCGCTGACATTCTAGATTCCATCAAGGAATCAAATGTAATTGGAATGGGTGCCACTGGTATTGTTTATAAGGTTGATCTGCAAAGATCCAATACAGTTGTTGCAGTTAAGAAGTTGTGGAGGTCATCAAGAACTGATATTGAATCTGGAAACAGTGAAGATCTTATAGGAGAAGTGAATCTTCTCGGTAGACTAAGACATAGAAACATAGTTCGTTTGCTAGGTTTGATTCATAATGACACTGAAGTAATGATAATTTATGAATATATGTCCAACGGTAATCTTGGAGATGCCTTGCATGGCAAACAAGCCGGGAGCTTGCTTGTAGACTGGGTATCCAGGTACAACGTAGCAGTTGGAGTGGCACAAGGCCTTGCTTATCTCCATCATGATTGTCACCCTCCCATCATCCACCGCGATATTAAGTCAAATAACATACTGCTTGATGCCAATCTTGAGACAAGGATAGCTGATTTTGGATTAGCCAGAACCATGGTAAGGAAGAACGAGACAGTTTCTGTGGTGGCTGGATCCTATGGTTACATAGCCCCAGAATACGGGTACACCTTGAAGGTTGATGAGAAGATTGACATATACAGTTTTGGAGTAGTCCTATTAGAGCTTCTCACAGGAAAACGTCCATTAGATCCTGAATTTGGGGAATCAGTGGACATTGTAGAATGGATTAGAAGGCAGATTAGAGACAATACACCTCTAGAACGAGTCTTAGACGACAAAGTAGGAAACTGCAAGTATGTTCAAGAAGAGATGCTTTTAGTACTTGGAATAGCTCTTGTTTGCACATCCAAGCTCCCTAAAGAAAGACCATCCATGAGGGATGTCATCACAATGCTTGGAGAGGCAAAGCCTAGGAGGAAAAGTAGTAGTGATGGTGAAGTTCTGGCAACAAACAAGGAAAATCCAGTTTTGTGTACATCCCCAGTAAACGACCTTCTCTAG 3042 0.4227 MCWFLLCYCCIACLTFCFAVEVNEEVSALLSIKSNLNNSFNSLRDWSLVDKSSEKNAAHCNWTGVGCNSVGAVEKLDLSHMNLSGHISDEIHRLKHLTSLNLCCNDFSSSLPSSVANLTALQNLDVSQNYFTGDFPIGFGRASALRILNASSNNFSGFLPEDIGNATSLELLDLRGSFFQGSIPKVFGSLQKLKFLGLSGNNLTGEIPIELGQLSSLESLILGYNVFEGRIPTEFGNLTNLKYLDLAVGNLDGEIPADIGRLQLLETIFLYKNNIRGRIPAAIGNMTSLLLLDLSDNILSGHIPIEITRLKNLQLLNLMCNWITGSIPPGFENLNRLEVLELWNNSMSGPLPVDLGKNSPLQWLDISSNSFSGEIPQTLCNKNNLTKLILFNNAFSGSIPATLSTCVSLIRVRMQNNLLSGTIPLGLGKLSKLQRLELANNSLTGQIPDDITSSTSLSFIDLSRNNLNYFLPSTILAIPSLQSFILSNNNLMGKIPDQFQECPSLSILDLSSNHLSGSIPASIASCQKLVNLNLKNNLLTGEIPTAIAMMPTLAELDLSNNSLTGGIPQTLGLAPALEALNVSYNKLEGQVPANGLLRTINPTDLVGNAALCGGVLPPCEQNHAVTASHGSSKPILTGWITGITSLLAIGIAILVVRSLYQKWYTHGGFFLGRFGKHSGEWPWRLMAFQRLSFTSADILDSIKESNVIGMGATGIVYKVDLQRSNTVVAVKKLWRSSRTDIESGNSEDLIGEVNLLGRLRHRNIVRLLGLIHNDTEVMIIYEYMSNGNLGDALHGKQAGSLLVDWVSRYNVAVGVAQGLAYLHHDCHPPIIHRDIKSNNILLDANLETRIADFGLARTMVRKNETVSVVAGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKRPLDPEFGESVDIVEWIRRQIRDNTPLERVLDDKVGNCKYVQEEMLLVLGIALVCTSKLPKERPSMRDVITMLGEAKPRRKSSSDGEVLATNKENPVLCTSPVNDLL* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01724 1013 FunFam MDIS1-interacting receptor like kinase 1 788 997 - -
Pte18g01724 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 22 177 - -
Pte18g01724 1013 SUPERFAMILY Protein kinase-like (PK-like) 690 979 IPR011009 -
Pte18g01724 1013 Gene3D Ribonuclease Inhibitor 306 627 IPR032675 -
Pte18g01724 1013 SUPERFAMILY RNI-like 148 546 - -
Pte18g01724 1013 SMART LRR_typ_2 190 214 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 238 262 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 310 333 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 550 574 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 94 118 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 478 501 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 430 454 IPR003591 -
Pte18g01724 1013 SMART LRR_typ_2 502 526 IPR003591 -
Pte18g01724 1013 Gene3D Transferase(Phosphotransferase) domain 1 788 1001 - -
Pte18g01724 1013 SMART serkin_6 702 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01724 1013 Pfam Leucine rich repeat N-terminal domain 23 68 IPR013210 -
Pte18g01724 1013 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Pte18g01724 1013 Pfam Leucine rich repeat 528 587 IPR001611 GO:0005515
Pte18g01724 1013 FunFam Leucine-rich repeat receptor protein kinase EMS1 279 362 - -
Pte18g01724 1013 Gene3D Ribonuclease Inhibitor 175 245 IPR032675 -
Pte18g01724 1013 PRINTS Leucine-rich repeat signature 505 518 - -
Pte18g01724 1013 PRINTS Leucine-rich repeat signature 550 563 - -
Pte18g01724 1013 Gene3D Ribonuclease Inhibitor 246 305 IPR032675 -
Pte18g01724 1013 ProSitePatterns Protein kinases ATP-binding region signature. 708 732 IPR017441 GO:0005524
Pte18g01724 1013 ProSiteProfiles Protein kinase domain profile. 702 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01724 1013 PANTHER RECEPTOR-LIKE PROTEIN 55 430 980 - -
Pte18g01724 1013 FunFam MDIS1-interacting receptor like kinase 1 702 787 - -
Pte18g01724 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Pte18g01724 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 363 623 - -
Pte18g01724 1013 Pfam Protein kinase domain 704 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01724 1013 MobiDBLite consensus disorder prediction 980 999 - -
Pte18g01724 1013 Gene3D Ribonuclease Inhibitor 20 174 IPR032675 -
Pte18g01724 1013 SUPERFAMILY L domain-like 73 179 - -
Pte18g01724 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 178 278 - -
Pte18g01724 1013 Gene3D Phosphorylase Kinase; domain 1 701 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01724 Pte-Chr18 28594301 28597557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01724 3 1014 Receptor kinase-like Gene Family AT1G08590 58.447 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte18g01724 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01724 - - qsa:O6P43_010449 1552.34