Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01713 ATGGCTGCAGCTATTGCCAATCTTGTAGTTGGGTCACTTGTTTGGGTAGAGGATGATGAAGCAGCTTGGTTAGATGGTGAAATTTTGGAGGTTAATGGTGAAGAAATTAAAGTCCTCTGCACGTCAGGAAAGACGGTTGTTGTCAAAGCATCTAACGTCTATCCAAAGGATGCTGAAGCCCCCCCAAGTGGAGTTGATGATATGACAAGGCTTTCCTATTTACATGAACCTGGAGTGCTGGCAAATTTAAAATCAAGATATGATATCAACGAAATCTATACATATACTGGAAATATCTTAATAGCCGTGAATCCTTTTAGAAAGCTGCCTCATCTATATGACAGCCACATGATGGCGCAATACAAAGGTGCAGCTTTTGGAGAGCTTAGTCCACATCCCTTTGCTGTAGCAGATGCTGCATATAGGCTTATGATCAGTGAGGGAATTAGTCAATCCATACTTGTAAGTGGTGAAAGTGGCGCGGGTAAAACAGAAAGTACTAAATTGCTAATGCGTTATCTTGCTTACATGGGAGGTAGAGCTGTGTCCGAGGGTAGGTCTATTGAGCAGAAAGTTCTAGAGTCCAATCCTGTTCTTGAAGCATTTGGTAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGCTTTGGCAAGTTTGTGGAACTTCAGTTTGACCAGAGGGGGAGAATTTCTGGAGCAGCTGTCAGGACTTACCTATTGGAAAGATCACGTGTTTGTCAGGTGTCTGATCCTGAGAGAAACTATCATTGTTTCTACATGCTTTGTGCTGCTCCTCCAGAGGATGTTCAAAAGTATAAATTAGGAAACCCTAGAACATTCCATTATCTGAATCAATCAAATTGCTATGAGTTGGATGGGATTGACGATTCAAAAGAATACATTGCAACAAGAAGGGCAATGGATATTGTTGGAATAAGCTCAGAAGAGCAGGATGCAATATTTCGAGTTGTGGCAGCAATTCTGCATCTTGGAAACGTTGAATTTTCAAAAGGGAAGGAAACAGACTCATCTATGCCAAAAGATGAAAAATCTCGGTTTCATTTGCAAACTGCTGCTGAGCTTTTCATGTGTAATGAGAAGGATCTTGAGGATTCTCTGTGCAAACGTGTGATTGTTACTCGAGATGAAACAATCACAAAGTGCCTAGATCCAGATTCTGCTGCTTTAAGTCGAGATGCTCTTGCTAAAATTGTTTACTCAAGGTTGTTTGACTGGCTTGTTGATAATATCAATAATTCACTAGGCCAAGACCCAGAATCAAAATTGTTAATAGGTGTGCTGGATATTTATGGTTTTGAAAGTTTTAAGACAAATAGTTTTGAGCAATTCTGTATCAATTTAACTAATGAAAAGCTCCAGCAACATTTCAACCAGCACGTTTTCAAAATGGAGCAAGAAGAATATACAAAAGAGGAAATCGATTGGAGTTATATTGAATTCGTTGACAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGTATTGTTGCTCTTTTGGATGAAGCCTGTATGTTTCCAAGATCTACACATGAGACTTTTGCTCAAAAGCTTTACCAGACATTCAAAAATCACAAGCGATTCAGCAAGCCAAAATTATCTCGCAGTGACTTCACAATATGCCATTATGCTGGTGATGTTACCTACCAAACTGAACTCTTCCTGGACAAGAACAAGGATTACGTTGTTGCCGAACATCAAGCTCTTCTTAGTGCATCTAAGTGCTCGTTTGTGTCAGGATTGTTTCCAGTTTTAGCTGAGGAATCATCCAGGTCATCAAAATTCTCATCGATAGGTTCTCGGTTTAAGCAACAATTGCAAGCGTTACTTGAAACTCTCAGTGCTACAGAGCCACACTACATTCGTTGCGTTAAACCAAACAATCTTCTTAAGCCTGCAATCTTTGAGAACAAAAATGTGCTGCAGCAACTACGGTGTGGGGGAGTTATGGAAGCAATTAGGATCAGTTGTGCTGGATTTCCTACTAGAAAACCCTTTGACGAATTTTTGGATCGTTTCGGCCTTCTCTCCCCTGAAGTATTGGATGGGAGTTCTGATGAAGCTGCCACTTGCAAGAGGCTCCTGGAGAAAATTGGCCTTGAAGGTTTTCAGATTGGGAAGACAAAGGTGTTTCTTCGGGCTGGTCAAATGGCAGAGTTAGATGCCCTTAGGAGTGAGGTCCTAGGAAGATCAGCAAGCATTATTCAGAGAAAAGTTCGCTCATATTTGGCTCGCAGAAGCTTTATCTCTCTCCGTTTTGCCACTATAAAGATTCAAGCAGCTTGCAGAGGACAACTTGCTCGACAAATCTATGAGAAAATGCGGCAGGAGGCATCCTCTCTAATGATTCAGAAAGATTTCCGCATGTATCTTGCAAGGAAAGCGTACAAAGAACTGCATTCATCTGCTGTCTCTATTCAGACTGGTTTGAGAGGGATGGCTGCTCGAAGTGAGTTGCGTTTCAGGAGACAGACTAAAGCAGCAATTATTATCCAGAGCCAATGTCGTAAATTCTTGGCCCAGCTTCATTTTAGGAGAATGAAGAAGGCAGCAATCACTACACAATCTGCATGGAGAGCTAGGGTTGCTCGTAAAGAACTCCGAAAGCTTAAGATGGCTGCCAGGGAAACTGGAGCTCTTCAAGCTGCCAAAAATAAACTTGAAAAGCAAGTTGAAGAACTTACATGGAGATTACAACTGGAGAAACGCATGAGGGCTGACATGGAGGAAGCTAAAGCACAAGAAAATGAAAAGCTCCAGTGCGCTTTGCGAGAGATGGAACTCCACATTAAGGAGACAAAAGTGCAGCTCGAAAAGGAGCGTGAGACTGCTAAAAGGGCTGCAGAGCAGCAACCTCTGATAAAAGAGGTTCCAGTTATTGACCAAGAAATTATGGAGAAGCTTAAAAATGAAAACGAAAAACTGAAGTCCTTGGTAAGTTCGCTGGAAATGAAAATTGAAGAAACAGAGAAGAAGTATGAAAAGGCAAATAGGAACAGTGAGGAACGGTTGAAGCAAGCTGTAGATGCAGAGTCAAAGATAATTCAGTTGAAGACTGCTATGCAAAGGCTTCAAGAGAAAATCTCTGATGCTGAATCAGAAAACCAGGTTCTTCGGCATCAAACTTTGATAAACTCACCAACAATGTCAGAACATTTGCGACCCCCTGTATCCCAGAAATTAGTAAACGGTCACCACTTAACTGAAGATCAAAAAGCCAATGAAGTACAGAATTTGACACCAACAAAAAAAATGGGTACCGAATCTGATAGCAAATTGAGTAGATCCAACATTGAACGTCAACATGAGAATGTTGATGCTCTCATTAACTGTGTCATGAAGAACATAGGCTTCAATCATGGAAAGCCTGTCGCAGCATTTACTATCTACAAATGCCTTCTCCACTGGAAATCTTTTGAAGCTGAAAGAACTAGTGTATTTGACCGGCTTATACAGATGATTGGTTCTGCTATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGTTGTCAAATACATCTGCTTTGTTGTTCTTGATCCAAAGGAGTCTGAAATCGTCCGGCACTGCTGGTACAACTCCCGCTCGAAAGCCACCTCCAACCTCCTTGTTTGGGAGGATGACCATGGGTTTCCGATCCTCCCCTTCGTCTACCAACCTTCCTGCTCCTGCATTAGAAGTGGTAAGACAAGTAGAAGCTAAATACCCTGCATTGCTTTTCAAGCAACAGCTGACAGCATATGTGGAGAAAATATATGGAATCCTCCGGGACAATTTAAAGAAAGAGTTGGCATCTCTTCTTTCCTTATGTATCCAGGCACCAAGGGCGTCAAAGGGAATGCTTCGGTCTGGAAGGTCCTTTGGCAAAGATTCCCCATCCAATCACTGGCAAGGCATTGTTGAAAGCCTCAACACTATGCTCTGTACACTGAAAGAAAACTTTGTGCCACCGGTTCTTGTTCAGAAGATATTCTCTCAGACCTTTTCATTTATCAATGTACAACTCTTTAATAGTCTTCTTCTGCGCCGTGAGTGTTGTACATTCAGCAATGGGGAGTATGTGAAAGCTGGTTTAGCTGAATTAGAGTTATGGTGCTGTGCTGCAAAAGAGGAGTATGCAGGAGTTTCTTGGGACGAACTTAAGCACATAAGGCAAGCCGTTGGATTCTTGGTAATACATCAGAAGTACCGAATCTCTTATGATGAAATCACCAATGATCTATGTCCGATCCTAAGCGTTCAGCAGCTCTATAGAATATGCACTCTTTACTGTGATGATCAATATAACACCCGAAGTGTTTCCCCAGATGTAATTTCCAGCATGAGGGTGCTTATGACGGAGGACAGCAATGATGCAGTTAGCAATTCGTTCTTGTTAGATGACAATTCCAGCATCCCATTCTCAGTTGAAGACCTATCTACATCTCTGCAAGAGAAGGAGTTTTTAGATATGAAACCCGCAGATGAGCTTCTTGAAAATCCAGCCTTCGAATTTTTACATGAGTAA 4533 0.4152 MAAAIANLVVGSLVWVEDDEAAWLDGEILEVNGEEIKVLCTSGKTVVVKASNVYPKDAEAPPSGVDDMTRLSYLHEPGVLANLKSRYDINEIYTYTGNILIAVNPFRKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMISEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAVSEGRSIEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQRGRISGAAVRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVQKYKLGNPRTFHYLNQSNCYELDGIDDSKEYIATRRAMDIVGISSEEQDAIFRVVAAILHLGNVEFSKGKETDSSMPKDEKSRFHLQTAAELFMCNEKDLEDSLCKRVIVTRDETITKCLDPDSAALSRDALAKIVYSRLFDWLVDNINNSLGQDPESKLLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSGLFPVLAEESSRSSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGFPTRKPFDEFLDRFGLLSPEVLDGSSDEAATCKRLLEKIGLEGFQIGKTKVFLRAGQMAELDALRSEVLGRSASIIQRKVRSYLARRSFISLRFATIKIQAACRGQLARQIYEKMRQEASSLMIQKDFRMYLARKAYKELHSSAVSIQTGLRGMAARSELRFRRQTKAAIIIQSQCRKFLAQLHFRRMKKAAITTQSAWRARVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADMEEAKAQENEKLQCALREMELHIKETKVQLEKERETAKRAAEQQPLIKEVPVIDQEIMEKLKNENEKLKSLVSSLEMKIEETEKKYEKANRNSEERLKQAVDAESKIIQLKTAMQRLQEKISDAESENQVLRHQTLINSPTMSEHLRPPVSQKLVNGHHLTEDQKANEVQNLTPTKKMGTESDSKLSRSNIERQHENVDALINCVMKNIGFNHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLFLIQRSLKSSGTAGTTPARKPPPTSLFGRMTMGFRSSPSSTNLPAPALEVVRQVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRASKGMLRSGRSFGKDSPSNHWQGIVESLNTMLCTLKENFVPPVLVQKIFSQTFSFINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCAAKEEYAGVSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYCDDQYNTRSVSPDVISSMRVLMTEDSNDAVSNSFLLDDNSSIPFSVEDLSTSLQEKEFLDMKPADELLENPAFEFLHE* 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01713 1510 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 FunFam Class V myosin 440 584 - -
Pte18g01713 1510 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Pte18g01713 1510 ProSiteProfiles Myosin motor domain profile. 63 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 Coils Coil 973 1049 - -
Pte18g01713 1510 Coils Coil 878 958 - -
Pte18g01713 1510 FunFam Myosin 2 313 428 - -
Pte18g01713 1510 Pfam DIL domain 1332 1434 IPR002710 -
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 807 836 IPR000048 GO:0005515
Pte18g01713 1510 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 FunFam unconventional myosin-Va 786 834 - -
Pte18g01713 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 884 IPR027417 -
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Pte18g01713 1510 Gene3D - 253 311 - -
Pte18g01713 1510 Gene3D - 12 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Pte18g01713 1510 FunFam unconventional myosin-Va 835 882 - -
Pte18g01713 1510 CDD MYSc_Myo11 77 721 IPR036018 -
Pte18g01713 1510 FunFam Myosin heavy chain 253 308 - -
Pte18g01713 1510 MobiDBLite consensus disorder prediction 1076 1103 - -
Pte18g01713 1510 Gene3D - 834 883 - -
Pte18g01713 1510 Gene3D - 786 833 - -
Pte18g01713 1510 Gene3D - 736 785 - -
Pte18g01713 1510 Gene3D - 440 624 - -
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 738 765 IPR000048 GO:0005515
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Pte18g01713 1510 Pfam Myosin N-terminal SH3-like domain 11 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 ProSiteProfiles Dilute domain profile. 1156 1456 IPR002710 -
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 735 757 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 806 828 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 783 805 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 758 780 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 831 853 IPR000048 GO:0005515
Pte18g01713 1510 SMART iq_5 854 876 IPR000048 GO:0005515
Pte18g01713 1510 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Pte18g01713 1510 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Pte18g01713 1510 Pfam IQ calmodulin-binding motif 762 779 IPR000048 GO:0005515
Pte18g01713 1510 Pfam IQ calmodulin-binding motif 833 853 IPR000048 GO:0005515
Pte18g01713 1510 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Pte18g01713 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 786 IPR027417 -
Pte18g01713 1510 SMART DIL_2 1331 1438 IPR002710 -
Pte18g01713 1510 MobiDBLite consensus disorder prediction 1081 1095 - -
Pte18g01713 1510 Gene3D Kinesin motor domain 66 663 IPR036961 -
Pte18g01713 1510 PANTHER MYOSIN 834 1444 - -
Pte18g01713 1510 Gene3D - 668 732 - -
Pte18g01713 1510 CDD MyosinXI_CBD 1107 1479 IPR037975 GO:0007015
Pte18g01713 1510 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Pte18g01713 1510 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte18g01713 1510 FunFam Myosin XI D 736 785 - -
Pte18g01713 1510 Pfam Myosin head (motor domain) 65 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01713 Pte-Chr18 28460700 28474827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01713 7 1509 Myosins gene family AT5G43900 75.298 0.0 2383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01713 K10357 - cave:132165739 2551.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01713 18 28460700 28474827 Pte18g01713 18 28460700 28474827 RCT