Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01707 ATGTGCAACGAACAAGGTGCACCAAGCAAGTTCTTGTCAGCACTTGTCGTAGATGATGATATTATCATCCAAAAGATTCACCAAAAGCTCTTGAGCAAACTGGGAGCCAAAATTATTCTGGCTGTAGGGAATGGGAAGGAAGCAGTAGATATCCACGTTCAGGGGCATTCTTTTGACCTTATTCTCATGGATATGGACATGCCTATCATGGATGGCATTGAGGCAACCAAGAAACTTCGTGCCATGGGAGTACATAGCCTGATTGCAGGAGTGTCGACGCGTTCTGGGGAAGAAGAAGTACAAGAATTTAAGGATGCTGGGTTGGATGAGTACCAAGAGAAGCCTTTAACCATTGCAAAGCTTACGTCAATTCTCAATAAGCTCCATCCATGA 393 0.4427 MCNEQGAPSKFLSALVVDDDIIIQKIHQKLLSKLGAKIILAVGNGKEAVDIHVQGHSFDLILMDMDMPIMDGIEATKKLRAMGVHSLIAGVSTRSGEEEVQEFKDAGLDEYQEKPLTIAKLTSILNKLHP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01707 130 SMART REC_2 12 125 IPR001789 GO:0000160
Pte18g01707 130 ProSiteProfiles Response regulatory domain profile. 13 129 IPR001789 GO:0000160
Pte18g01707 130 CDD REC_hyHK_CKI1_RcsC-like 15 125 - -
Pte18g01707 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 128 - -
Pte18g01707 130 SUPERFAMILY CheY-like 13 128 IPR011006 -
Pte18g01707 130 Gene3D - 3 129 - -
Pte18g01707 130 Pfam Response regulator receiver domain 15 125 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01707 Pte-Chr18 28421865 28422602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01707 10 128 Response Regulator Gene Family AT3G04280 44.628 5.52e-26 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g01707 Response_reg 6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01707 - - hsyr:120120945 143.28