Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01699 ATGGCGACGTTTGCGAAACCAGAGAATGCTTTGAAACGAGCTGAAGAATTAATTAATGTTGGACAGAAGCAAGACGCTCTTCAAACTCTTCATGACCTCATCACTTCCAAAAGATATAGAGCGTGGCAGAAGACCCTTGAGAGAATTATGTTCAAATATGTGGAGCTTTGCGTTGAGATGCGGAGAGGTCGTTTTGCCAAGGATGGTCTCATTCAATATCGAATCACTTGTCAACAAGTGAATGTTAGTTCATTAGAAGAAGTGATCAAGCATTTTATGCATCTCTCAACAGAGAAAGCTGAACAAGCTCGTAGTCAAGCACAGGCCTTAGAAGAAGCTCTTGATGTTGATGATCTGGAAGCTGATAAAAGGCCAGAGGACTTAATGCTGAGTTATGTTAGTGGCGAGAAAGGAAAGGATAGATCTGACAGGGAGCTTGTTACACCATGGTTTAAGTTTCTTTGGGAAACATACAGGAGTGTTCTTGAGATCTTACGGAACAACTCAAAACTTGAAGGTTTATATGCTATGACAGCACACCGAGCTTTTCAGTTTTGTAAGCAGTATAAGCGAACAACAGAGTTTCGTAGGCTTTGTGAAATAATAAGGAACCATCTCGCTAATCTTAATAAGTACCGAGACCAAAGGGATCGACCTGATCTTACTGCTCCTGAAAGTTTGCAACTGTATCTTGATACGAGATTGGAGCAGCTCAAAGTTGCTACAGAACTTCAAATGTGGCAGGAAGCTTTTCGATCTATTGAAGATATTTATGGACTGATGTGTTTGGTCAAGAAGACTCCCAAGCCATCTCTGATGGTTCTTTATTATGCTAAGCTGACAGAAATATTTTGGATATCTAGAAGCTATCTGTATCATGCATATGCTTGGTTCAGGCTCTTCCTGCTGCAGAAAAGTTTTAATAAGAATCTGAACCAGAAGGATTTGCAGTTAATAGCCTCATCAGTTGTTTTGGCTGCACTTTCTGTTTCTCCCTATGATCATTCCCATGGGGCATCTCATTTGGAGCTTGAACATGAGAAGGAGAGAAGCACGAAGATGGCTAATCTTATAGGGTTTAATCTTGAAGCTAAACCTGAGAGCAGAGAAATGCTCTCGAGGTCAGCTCTTCTCTCTGAACTGGTCTCCAAAGGTGTGATGTCTTGTGCTACTCAGGAAGTTAAAGATATCTACCATATTTTAGAATACGAGTTTGTCCCACTTGATCTTGCAGTGAAAGTTCATCCCTTACTCACTAAAACTTCTAAGGTTGGGGGTAAGATATCTTCAGGTTCTTCTGTACCAGAGGTCCAATTGTCTCAGTACATTCCGGCCCTTGAGAAACTTGGAACCTTGAGATTGCTGCAGCAGGTTTCCAAAGTTTACCGGGCAATGAAGATTGAGACTCTTTCTGGCATGATCCCATTTTTTGATATTGCCGATGTGGAAAAGATTACAGTAGATGCTGTCAAACATAATTTTGTGCAATTGAAAGTTGACCATGCAAGGAATTGTCTTGTCTTCTGTGAGAGGAATCTTGAATCTGATGGCTTATTTGATCAACTGGCAAATTTGGCTGAAGAGTTAAGTGATGCAAGATCAATGATCTATACCCCCATTAAGAAAGCATCAAAAATTGGTGAGATGCTTCCCAATTTGCACGAAGCTTTGGAGAAAGAGCACAGAAAACTTCTTGCTAGGAAATCAGTAATTGAGAAGCGCAAGGAGGATCAAGAAAGACAACTTCTAGAAATGGAACGTGAGGAAGAAACAAAGAGGTTGAGGATACGCAAGATAACTGAAGAAGCGGAGCAAAAACGGCTAGCCACTGAGTATGAGCAGAGGAAAACCCAAAGGATTCTAAGAGAAATACAGGAGAAGGAGCGGGAAGAAGCCCAGGCTGTTTTGGAAGAGCTCAAAAAGAAGGGGAAGAAGCCTGTCATAGAAGGGCATAAGCTGACCAAAGAAACGTTAAGGGAATTGGCCTTGAGTGAGCAACTTCGGGAAAAGCAGGAAATGGAAAAGAAACTGCAAAAACTCACTAAGACCATGGATTATTTGGAGCGAGCGAGAAGGGAAGAGTCTGCTCCTCTGATTGAAGCTGCATATCAACAGCGATTAGTGGAAGAGAGAAGATTGCATGAATATGAGCAACAACAAGAGACTGCACTTAGCAAGCAGCGTCATGAGGGGGACTTGAAGGAGAAGGAGAGGCTGGCTCGAATGAAGGACAATAAGGTGATTTTTCAAGGAAGAGTCGAAAGTCATCGCCAATCAGAATTTGACAGATTAAGGAAGGAAAGGGAAGAGCGAATCTCTAGCATTTTACATTCCAGGAAACTGCAAAGGGAGAAGATGAGAAAGTTCAAATATTCTTTGATGTTGGAAGAAGAGAGGCTGAAAAAATTGCGAGAGGAGGAGGAAGCTCGAAAACGCGAGGAGATCGAGAGGCGCAAAGGGGAAGAGGCGGAGCGTAAAGCAAAATTGGATGAGATTGCAGAGAAACAGAGGCAGAGGGAGAGGGAACTGGAGGAAAAAGAGAGGCTCAGGAAAGAGGCACTGCTCAAATCTACTACTGAAGCACCAGCCAGGCCCACTGAACCTGCCGCTGCACCACCAGCAGTTGCTGCAGCTTGGCCATCAGAGTCAAGATCTGTTGTTGCACCAGCCCCCGGCAAATATGTTCCTAGGTTCCGGCGCTCCGAAAGCACTGGTCAGACTCCAGAAACTGATCGATGGGGTCATAGCAACAGTGGAAGGCAAGATGATAGGCTGACACCAGCTGGTGATAGGTGGCGCAGTGATGATCGTAGACCCTCATTCAGTGGTTCAAGGTCATCGTCAACATGGTCATCATCCAAGAACCCACCTCGTGGGTCTGATCGCTGA 2889 0.4368 MATFAKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRRGRFAKDGLIQYRITCQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRSVLEILRNNSKLEGLYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRLEQLKVATELQMWQEAFRSIEDIYGLMCLVKKTPKPSLMVLYYAKLTEIFWISRSYLYHAYAWFRLFLLQKSFNKNLNQKDLQLIASSVVLAALSVSPYDHSHGASHLELEHEKERSTKMANLIGFNLEAKPESREMLSRSALLSELVSKGVMSCATQEVKDIYHILEYEFVPLDLAVKVHPLLTKTSKVGGKISSGSSVPEVQLSQYIPALEKLGTLRLLQQVSKVYRAMKIETLSGMIPFFDIADVEKITVDAVKHNFVQLKVDHARNCLVFCERNLESDGLFDQLANLAEELSDARSMIYTPIKKASKIGEMLPNLHEALEKEHRKLLARKSVIEKRKEDQERQLLEMEREEETKRLRIRKITEEAEQKRLATEYEQRKTQRILREIQEKEREEAQAVLEELKKKGKKPVIEGHKLTKETLRELALSEQLREKQEMEKKLQKLTKTMDYLERARREESAPLIEAAYQQRLVEERRLHEYEQQQETALSKQRHEGDLKEKERLARMKDNKVIFQGRVESHRQSEFDRLRKEREERISSILHSRKLQREKMRKFKYSLMLEEERLKKLREEEEARKREEIERRKGEEAERKAKLDEIAEKQRQRERELEEKERLRKEALLKSTTEAPARPTEPAAAPPAVAAAWPSESRSVVAPAPGKYVPRFRRSESTGQTPETDRWGHSNSGRQDDRLTPAGDRWRSDDRRPSFSGSRSSSTWSSSKNPPRGSDR* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01699 962 Coils Coil 786 856 - -
Pte18g01699 962 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pte18g01699 962 Pfam PCI domain 373 508 IPR000717 -
Pte18g01699 962 Coils Coil 663 690 - -
Pte18g01699 962 MobiDBLite consensus disorder prediction 915 940 - -
Pte18g01699 962 Coils Coil 554 602 - -
Pte18g01699 962 MobiDBLite consensus disorder prediction 941 962 - -
Pte18g01699 962 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pte18g01699 962 Coils Coil 622 642 - -
Pte18g01699 962 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 946 IPR027512 GO:0005852
Pte18g01699 962 MobiDBLite consensus disorder prediction 802 857 - -
Pte18g01699 962 MobiDBLite consensus disorder prediction 900 914 - -
Pte18g01699 962 Gene3D UVR domain 217 268 - -
Pte18g01699 962 Gene3D - 269 343 - -
Pte18g01699 962 Gene3D - 351 494 - -
Pte18g01699 962 MobiDBLite consensus disorder prediction 802 962 - -
Pte18g01699 962 Coils Coil 699 719 - -
Pte18g01699 962 MobiDBLite consensus disorder prediction 717 739 - -
Pte18g01699 962 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pte18g01699 962 Coils Coil 93 120 - -
Pte18g01699 962 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pte18g01699 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 953 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01699 Pte-Chr18 28365616 28370928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01699 1 949 Eukaryotic Initiation Factors Gene Family AT4G11420 68.154 0.0 1268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01699 K03254 - gmx:100803796 1308.89