Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01691 ATGAAGAGAACTAGAGAAAGTACAATGGGAATGGAGATGGCCAACTGTCTATTACTGCTCTCTCATGGCATAGAAACCAAGCAATCAAAGGGCTTCACCCCAGAAGTTTTCGAGTGCAAGACCTGCAACCGCCAGTTTCCATCGTTTCAAGCACTCGGCGGCCACCGGGCTAGCCACAAGAGGCCTAAGCTGGACTCAGCAGCAAAAGCTCCGGCGAAATTCCTAACCACAGGAAACAAACCTAAGTTGCATGAGTGCTCCATATGTGGCCTCAAATTTTCTCTTGGTCAGGCACTGGGAGGCCATATGAGGCGACACAGAGCTGAACAAATGGGTGAAGAACTATCTACCATAAACCACGTCATAGCGAAGGTTCCGGTGCTGAAAAGATCAAATAGTACAAGGGTCACGTGCTTGGACTTGAATTTGACACCTCTGGAGAATGATCTGAAGCTCTTGTTTGGAAAGATGGCACCTAAAGTGGATGCTTTTGTCTAA 498 0.4759 MKRTRESTMGMEMANCLLLLSHGIETKQSKGFTPEVFECKTCNRQFPSFQALGGHRASHKRPKLDSAAKAPAKFLTTGNKPKLHECSICGLKFSLGQALGGHMRRHRAEQMGEELSTINHVIAKVPVLKRSNSTRVTCLDLNLTPLENDLKLLFGKMAPKVDAFV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01691 165 Pfam C2H2-type zinc finger 36 62 - -
Pte18g01691 165 Pfam C2H2-type zinc finger 84 109 - -
Pte18g01691 165 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Pte18g01691 165 PANTHER ZINC FINGER PROTEIN ZAT5 11 149 - -
Pte18g01691 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Pte18g01691 165 SUPERFAMILY beta-beta-alpha zinc fingers 36 106 IPR036236 -
Pte18g01691 165 Gene3D Classic Zinc Finger 35 106 - -
Pte18g01691 165 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Pte18g01691 165 SMART c2h2final6 84 106 IPR013087 -
Pte18g01691 165 SMART c2h2final6 37 59 IPR013087 -
Pte18g01691 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01691 Pte-Chr18 28323236 28324017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01691 1 162 C2H2 Transcription Factor Family AT2G37430 49.425 5.49e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte18g01691 zf-C2H2_6 1.3e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01691 - - qsa:O6P43_010388 235.343