Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01689 ATGGAGATGCAGAGAATCATCGAAGTTCCGCATAAAAACATGGATAAGCGTCCCAGAAAGAGACCTCGTTTAGCCTGGGATGTTCCTCCACAGATAATTCCACCTCCAATGGTTCTTCCAGCGATATATTGTGGACAAGAGTGCGTAAATGTTGCAGCTCCTAGTCAATCATATTCGACTATGTTTTACAGGGGATTACCGCGCAACGGTTCACCACCGTGGAGACCTGATGACAAAGACGGTCATTATGTTTTCGCTATTGGGGAGAATCTAACACATCGTTATAGAATTGTCAGCAAAATGGGTGAAGGAACATTTGGTCAAGTGTTAGAGTGTTTAGATAACGAAAGGAATGAGGTTGTGGCTATCAAAATTGTTCGCTCCATCCACAAATACCGCGAGGCTGCAATGATTGAGATCGATGTATTGCAGAGGCTTGCCAGGAACGATATAGGTGGTACGCGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGATCTTGTCCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTGGCATTCATGCATGATCTGCGGTTAATACACACGGATTTAAAGCCAGAGAATATTCTTCTTGTTTCATCAAGTTGTATAAAAGTGCCAGATTATAAGTTTCTATCGCGGTCTGTCAAAGATGGTTCCTATTTTAAGAACCTTCCGAAGTCAAGTGCGATAAAGCTCATTGACTTTGGGAGTACAACTTTTGAGCATCGTGATCACAATTACGTGGTGTCAACACGACATTATCGGGCTCCTGAAGTTATCTTGGGTCTTGGATGGAACTATCCTTGTGATTTGTGGAGTGTGGGTTGCATACTTGTTGAGCTCTGTTCTGGTGAAGCTCTTTTTCAAACGCACGAGAATTTAGAACATTTGGCCATGATGGAAAGGGTTTTAGGGCCACTGCCCCAGCATATGACAATCAGAGCAGACCAACGTGCAGAGAAATATTTCAGGAGGGGTGCACGATTAGTTTGGCCTGATAGTTCAACTTCCCGAGAAAGCATTAGGGCAGTCTGGAAATTGCCTCGTTTACCGAATCTGATAATGCAACACGTCGATCATTCCGCTGGAGATTTGATTGACCTCTTGCAGGGTCTCTTGCGATATGACCCAGCGGAGCGGCTGAAAGCCAGGGAAGCTTTGAGGCATCCCTTCTTCACTAGAGATACTAGAAGATGCTGCTATAGCCATCTATAG 1308 0.4388 MEMQRIIEVPHKNMDKRPRKRPRLAWDVPPQIIPPPMVLPAIYCGQECVNVAAPSQSYSTMFYRGLPRNGSPPWRPDDKDGHYVFAIGENLTHRYRIVSKMGEGTFGQVLECLDNERNEVVAIKIVRSIHKYREAAMIEIDVLQRLARNDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLRLIHTDLKPENILLVSSSCIKVPDYKFLSRSVKDGSYFKNLPKSSAIKLIDFGSTTFEHRDHNYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMTIRADQRAEKYFRRGARLVWPDSSTSRESIRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDTRRCCYSHL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01689 435 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Pte18g01689 435 CDD PKc_CLK 82 423 - -
Pte18g01689 435 SMART serkin_6 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01689 435 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 427 - -
Pte18g01689 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Pte18g01689 435 ProSiteProfiles Protein kinase domain profile. 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01689 435 FunFam Serine/threonine-protein kinase AFC2 82 175 - -
Pte18g01689 435 FunFam Serine/threonine-protein kinase AFC2 171 423 - -
Pte18g01689 435 Gene3D Transferase(Phosphotransferase) domain 1 149 423 - -
Pte18g01689 435 Pfam Protein kinase domain 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01689 435 SUPERFAMILY Protein kinase-like (PK-like) 82 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01689 Pte-Chr18 28313868 28318106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01689 95 423 Core Cell Cycle Gene Families AT1G76540 26.608 1.48e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pte18g01689 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01689 K08287 - zju:107432833 794.267