Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01680 ATGGAGACCAATCTTAAGAGTGGTAGTGTTATTGCCAAATTAATGGGTTTTGATGAGCCACCTTCTCAATATCCTGCAATGAAAAAGCAGAGGGTGCTATCAGAGAAGTATCTCCAAAAAATTGCATTGATAGGTGTTAGAGAGAACCGATCCATTTCAGGTCTCCAATCTGTAAGGTGTAATTCTCCAGATACTAAAAAGACAGTTGTTGGTGCTGGATACCATCTTGGCAATGATAATATTGATAACAGTTTAGATCTACGAGAATCGCGGGGGATCTTAGATGTTAATGTGGAATTTTGTCATAATTACTTTCTGAAGCCACAAAATCTGTTCATGAAGCAACAGTTGCAGAATGACTCTTCCTACTCAGGAGAAGATGCAGCAGATTTTTGTTTGCGTTCTTCTGGAATTGGAAAGCGTAACGTAATAAGCAGGAAATCAAGCAGCCTAACAGAGGGAAAATATGTGCATTCACTTCAAACTTCCCATGACGAGATCCAGAGGAGTGTGCATGAAAATTCAGGACCTAGGAGAATAAGTAGATTCTCAAGAACTAAACTGGAACCAAAAGATGGCTTATTTCTTGCTCAGAGATTTTCTGCTTCAAATTCACATTCTGGAAAGTCTGAGAACAGCATTGGATGTTTCTTCCTACCTGGTTCTCGTGAAGTTACTAATATGGTTCCTGCTTTAAACAACTGCTTTTCAAGTCTCCATAGAATCAGTACTGAAGTAAATAAGACAAACAAATTGGGCAGTCAAATGAACGCTGGTAACCAATCATCCAATATAAGTGAAATTTCTGAAAAACCCCAGGAATGGAATGTAGCACATAATTTTTCAAGAAAACTACGAAGCTCAGAGTTAAGTGTAGATAGGAAATCTGAGAGATTGGAGTCTCTTTCAACTACTTATGGTAAGAGGAAATATTACCCCTCTTCATCCACAAGTTTAGATGGGTTGAAGACTGGTATCGCAGAAAAGAAAACATCAGAAGCTCAGAAGGTGGCTGAAAATTCTGAAGTTGGACTTCTTGGACAAAGGATTACTCATGGTGAATTTCGGACTAGACCATACTATAAAAGTGGACGAACTAAGTCGAATTATGATTTGAACCATATACTAAGATACAAAAAATGTTCAAGTTTCCCGGAAGCCAATCTCAGTGCCAAGAATAGGGATAATAGTAAGGTAAGGCAGATCAGAAAAGCTGCATCTTTTACCAGCAATGGTTTCAGAAGTAAAAGTAAGGATGGTCCCTTTGGTTTGAAGCTGGAAAATTCTTCAACAAGGTCATCATACAAGTCAGACAATCAAAATTCCCATCGGAAACTTTTCCCTCCATTTAGGACATTTAGATCTGGTGCTCAAGGTTCTTTGTCTGTCTTATCTGTGGAAAGCAACACTACTGAAGCTAATACTTGCATCCAGCACGGGATAATGAAAGAACATTGTAAGGATGATATTTCTGATCTATGTTTATGCAAGAAGAAGGATGAGATAATAATGTCTGAACTTGGAGATGATGTGATGCCTCATGATGTTGCATCCAATGCAAAGACTGAAGTTTCTAGTGACACTTATGGAAATCAACAGGATATGCAGTATGAGATGACCCCCATTGATTTGTGCACTGGAGATTATATCTGTCCTTTCTCACATTCTTCAGTCCAACAGGAAACATTGAGTGATATCCAAGATACAGGCTCTCTGTACTCATCCTGTCTGGACTCAGATCCAGACTCACTGCTGAACTTTCACGAAGCTTGTCATTCTAGTCCCATTTCAGTTCTTGACTCAACCTTTGGAGAGTTGAAATATTCATGCTCTGGTTGTTTTGAGGCTGCTATTGATGATTTTTATGCCTCAGAAAATGATTGTCAAGAACCTGAAATGAATATTTCAAGTGATGAAGATTCCGGGGAAGAAACAGGTGATGACACTGAAGAAAATGACAAAATTTTCAGACCATTAAAAGTTGAAGAAAGCAGGGACTTCTCATACCTCCTTGAGGTTTTAAATGAGTCAGGATTTTACAAATGGAACCCGCAAACAATCACTTGCACATGGCACTCTCCAGAATGCCCTATAAGTCCTTTTGTGTTTGAGGCCCTAGAAAAGAAGTTTGGTCAGCAGACTTCTTGGATGAGATCAGAGAGAAGGCTTATTTTTGACCGAATCAATTTAGGATTGACGGAGATTATTCAGCCATGTTTGGGTGTTCCCACATGGAAAATGCCTGTGGTTAGAAGGTTGAATCCCCAAGTAAGCCATGATATGATTGAGAAAGAGCTGTGGGCAATGTTGTCTGTACCAGCGAAGGAGACCAGCAACAATACTGAAGAACTTTTTGCATATGAGTTTAGGACAGACCTCGGGGAAGATATTGATACAATTGCTAGAGATATAGTTCAATGTTTAGTAGACGAGCTTGCAGAAGAGATTGTTGAGTAG 2457 0.3919 METNLKSGSVIAKLMGFDEPPSQYPAMKKQRVLSEKYLQKIALIGVRENRSISGLQSVRCNSPDTKKTVVGAGYHLGNDNIDNSLDLRESRGILDVNVEFCHNYFLKPQNLFMKQQLQNDSSYSGEDAADFCLRSSGIGKRNVISRKSSSLTEGKYVHSLQTSHDEIQRSVHENSGPRRISRFSRTKLEPKDGLFLAQRFSASNSHSGKSENSIGCFFLPGSREVTNMVPALNNCFSSLHRISTEVNKTNKLGSQMNAGNQSSNISEISEKPQEWNVAHNFSRKLRSSELSVDRKSERLESLSTTYGKRKYYPSSSTSLDGLKTGIAEKKTSEAQKVAENSEVGLLGQRITHGEFRTRPYYKSGRTKSNYDLNHILRYKKCSSFPEANLSAKNRDNSKVRQIRKAASFTSNGFRSKSKDGPFGLKLENSSTRSSYKSDNQNSHRKLFPPFRTFRSGAQGSLSVLSVESNTTEANTCIQHGIMKEHCKDDISDLCLCKKKDEIIMSELGDDVMPHDVASNAKTEVSSDTYGNQQDMQYEMTPIDLCTGDYICPFSHSSVQQETLSDIQDTGSLYSSCLDSDPDSLLNFHEACHSSPISVLDSTFGELKYSCSGCFEAAIDDFYASENDCQEPEMNISSDEDSGEETGDDTEENDKIFRPLKVEESRDFSYLLEVLNESGFYKWNPQTITCTWHSPECPISPFVFEALEKKFGQQTSWMRSERRLIFDRINLGLTEIIQPCLGVPTWKMPVVRRLNPQVSHDMIEKELWAMLSVPAKETSNNTEELFAYEFRTDLGEDIDTIARDIVQCLVDELAEEIVE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01680 818 Pfam Domain of unknown function (DUF4378) 666 815 IPR025486 -
Pte18g01680 818 PANTHER AFADIN 4 59 - -
Pte18g01680 818 MobiDBLite consensus disorder prediction 424 446 - -
Pte18g01680 818 MobiDBLite consensus disorder prediction 632 649 - -
Pte18g01680 818 MobiDBLite consensus disorder prediction 419 447 - -
Pte18g01680 818 MobiDBLite consensus disorder prediction 631 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01680 Pte-Chr18 28219101 28223248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01680 576 817 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.061 2.67e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01680 - - qsa:O6P43_005723 301.982