Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01656 ATGTCTCCTAGGATAGTGACATTGGAGTTCTCTCCAAGATTTCAGCCGCACAAACTCGAAGCTCAGCTCGCCACATCGAGTCCTTTCTCTTTCTGTATCAGTGATGGAAAGACCATGAACTCCAATAACACCAGTTCAAATTCAAATTCGATGGCAAATTCAGCTCCTGCTGATGGTTCAGATAAGAAGATCAGGAAGCCTTATACAATCACCAAGTCCAGAGAAAGCTGGACAGAAGAAGAGCACGACAAGTTCCTCGAAGCTCTGCAATTATTTGACCGTGATTGGAAGAAAATTGAAGATTTTGTTGGTTCAAAAACAGTTATTCAGATCAGAAGTCATGCCCAGAAATACTTCTTGAAGGTCCAAAAGAATGGGACTGTAGCACATGTGCCGCCTCCCCGTCCTAAGCGCAAGGCTGCTCATCCTTACCCACAAAAAGCATCCAAAAATGTGTTGATTCCACTGCCTGCATCGGTGGCTTACCCATCTTCAGTAAATAACATCGTTCCTGCATATAGCTCATGGGACGATGCTTCTTTGCTGATAAACAACGGATCTAGCAAAGCCATAACATGTCAAGATGAACTCAACAATCTTCATATAACAGAAGCTGATATTAAATCAAAGGGGTTAGCAATGATCAATAGTTGCAATCTTAGTGGTGCTGGAAGCTCCAGCGGGACAGGGTTGAGTTCTGAAGATACAAAGCAGGGTAAACAAGCTCCAGTTGTACACGCTACACCAGACTTTGCAGAGGTTTACAGTTTCATTGGTGGCGTCTTTGATCCAGAAACAAAAGGCCATGTCCAGAAATTGAAGGAGATGGCTCCCTTAAATTTTGAAACTGTTCTACTGTTGATGAGAAATCTCACCATAAACTTGTCCAGCCCTGATTTTGAGCCAATTAGAAATATATTGTCAACATATGATGTCAGTATCAAGACGGCAAGAGTTGATCCAGAAAAAGATGTGACTCGGGATCTATCGTGTCAAACGCTTGACTAG 1008 0.4266 MSPRIVTLEFSPRFQPHKLEAQLATSSPFSFCISDGKTMNSNNTSSNSNSMANSAPADGSDKKIRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLIPLPASVAYPSSVNNIVPAYSSWDDASLLINNGSSKAITCQDELNNLHITEADIKSKGLAMINSCNLSGAGSSSGTGLSSEDTKQGKQAPVVHATPDFAEVYSFIGGVFDPETKGHVQKLKEMAPLNFETVLLLMRNLTINLSSPDFEPIRNILSTYDVSIKTARVDPEKDVTRDLSCQTLD* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01656 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Pte18g01656 335 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Pte18g01656 335 PANTHER SWI/SNF COMPLEX-RELATED 41 296 - -
Pte18g01656 335 SMART sant 73 121 IPR001005 -
Pte18g01656 335 FunFam protein REVEILLE 6 isoform X1 76 124 - -
Pte18g01656 335 CDD SANT 76 119 IPR001005 -
Pte18g01656 335 MobiDBLite consensus disorder prediction 42 63 - -
Pte18g01656 335 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Pte18g01656 335 MobiDBLite consensus disorder prediction 42 56 - -
Pte18g01656 335 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 121 IPR006447 GO:0003677
Pte18g01656 335 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Pte18g01656 335 ProSiteProfiles SANT domain profile. 72 125 IPR017884 -
Pte18g01656 335 Gene3D - 77 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01656 Pte-Chr18 27891629 27894655 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte18g01656 Myb_DNA-binding 5.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01656 - - gsj:114372630 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01656 18 27891629 27894655 Pte18g01656 18 27891629 27894655 RCT