Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01653 ATGGAGGGTAGGCTTCTACTCGCGTTCTCTCTCACACTCACACTGTCTTCTCTCCTGCGATTGGCTTCAGCTCAGATGCCAGGTTTTGTAAGTTTCGATTGTGGAGGTAACGAAACCTTTAATGATGAACTTGGAATTCATTGGATTCCTGATAATATTACTTTTGGAGAATCGAGCACTATATCAATTGCAAATGAAACACGAAAGCAATACATGACTCTACGACACTTTCCTGCTGATTCCAGGAAGTATTGTTACACTCTTAATGTGATGAGCAGGACACGGTATCTGATAAGAGCAACATTTCTGTATGGAAACTTCGACAACAATAACGTGTATCCAAAATTTGACATTTCCTTTGGGCCAACTCATTGGTCAACAATTGTTATATCCGATGCTAGCACCATAGAGATGCAGGAACTTATTTTTCTGGCCTCAACTCCTTCTGTCAGCGTGTGTTTGTCCAACGCAACGACTGGGGTGCCATTTATTTCTACTCTCGAACTTCGACAATTCAACGGTTCTGTATACTACACTGACTTTGAGGACCGCTATTACCTCAGTGTCTCTGCGCGGATAAATTTCGGAGCAGAATCTGAAGCTCCAATTAGGTATCCGGATGACCCGTTTGACCGAATTTGGGAATCGGACTCTGTAAAGAAAGCAAATTACCTTGTTGATGTTGCTGCTGGAACTGAAAAGGTTTCAACCAAGTTTCCGATTGATGTTAACCGAGATGAAATGCCACCTGTGAAAGTTATGCAGACAGCAGTGATAGGTACACTGGGAACTCTAACTTATAGGTTAAACCTGGACGGTTTTCCTAGTAGTGGTTGGGCGTTCACCTACTTTGCTGAAATCGAAGAGTTGCCTCCAGATGAATCAAGGAAGTTCAGGCTGGTACTTCCAGGGCAACCTGATCTCAGCAAAGCTGTTGTTAATATTCAAGAAAATGCCCAAGGAAAATATCGTTTGTATGAACCAGGGTATACCAACATCTCACTTCCCTTTGTGTTGTCTTTCAAATTTGGGAAAACAACTGATTCTTCAAGGGGCCCTCTCGTGAATGCAATGGAGATAAATAAGTATCTGGAGAAAAATGATGGCTCTGTTGATGGTGGATCTATTTATAGTGTAGCATCACACTTGTCTTCTGGAGACTGGGCCCAAGAAGGTGGGGATCCCTGCCTTCCAGTCTCATGGTCATGGTTGCGATGTAACTCAGATCCTCAACCCACAATATCTTCAATTTTGTTGTCGTCCACGAATTTGACGGGCAATATACCTTCAGATATCTCCAAGTTGACTGGTTTGGTTGAATTGTGGCTTGATGGAAATATGCTGACTGGTCCAATACCTGATTTGTCTGGATGTGTAGGCTTGCAGATCATTCACCTTGAAAACAATCAATTAAGGGGTGAGATCCCATCGTCTCTAGCCAATCTCCCAAATTTGAGGGAACTATATCTACAGAACAACCAGTTATCTGGAAAAGTGCCTTCAGGTCTCATTGGTGGAAAATTACTTCTGAACTATTCTGGAAACATTTATCTTCATAAAGGGAGCAGACAAGGAAATCATGTTAATATAATTATTTATTCATCACTTGGGGCAGGAGTGCTTCTTTTAGCTGCCATGCTATTTTTCCTATGCATATGCAAGGAGAGGAAACAAAATTATAAGGATGATCAACTTCTTTCTCTCCCCACTCAAAAACCGGTTTCTTCCAAGAATGATGCTCGCACTGATGCAGCACACTGCTTTAGTTATTCTGAAATTGAAGATGCTACAAACAAGTTTGAGAGAAAAATTGGCTCTGGAGGTTTTGGTGTTGTATACTATGGGAAACTGAAAGATGGGAAAGAGATTGCAGTGAAAGTTTTAACCAGTAATTCCTACCAGGGGAAGCGGGAATTTTCCAATGAGGTGACTCTCCTTTCGAGGATTCATCACAGAAACTTGGTGCAGTTTATTGGGTTCTGTCGAGATGAAGGGAACAGTATTCTTGTCTATGAGTTTATGCACAATGGAACTCTTAAGGAACACCTTTACAGTCCATTAACCCATGGACAGAACATCAACTGGATCAATCGCCTGGAGATCGCTGAAGATGCAGCTAAAGGGATTGAATATCTTCATACAGGCTGTGTACCTGCCATAATTCATCGAGACCTGAAAACCAGTAACATTCTTCTTGACAAACACATGCGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGCTTCTCATGTATCAAGTATAGTCCGGGGCACAGTAGGATATTTGGATCCTGAGTATTACATCTCGCAGCAGCTGACAGACAAAAGTGATGTATACAGTTTTGGTGTCATCCTTCTTGAATTAATCTCTGGCCAAGAAGCAATATCAAATGAAAATTTTGGTGTTAATTGCCGAAACATCGTTCAGTGGGCCAAGTTACACATAGAGAGTGGCGACATTCAAGGTATCATTGATCCATTTCTGCGCAATGAGTATGATATTCAATCAATGTGGAAGATAGCAGAGAAAGCGTTGATGTGTGTTCAACCTCATGGACACATGCGGCCATCCATCTCAGAAGTTCTGAAGGAGATCCAAGATGCAATATCCATAGAGAAGGAATCTGAGACAATGAGAGATCTCCATTCAGATAATATGTCAAGACATTCTATTCATTCAATGAACATCGGCTCCCTAGATTTGGGTGGAACCGACCATTATCTGTCAATAGATGAATCCATTGCACAGCCTACTGCACGATAG 2778 0.4172 MEGRLLLAFSLTLTLSSLLRLASAQMPGFVSFDCGGNETFNDELGIHWIPDNITFGESSTISIANETRKQYMTLRHFPADSRKYCYTLNVMSRTRYLIRATFLYGNFDNNNVYPKFDISFGPTHWSTIVISDASTIEMQELIFLASTPSVSVCLSNATTGVPFISTLELRQFNGSVYYTDFEDRYYLSVSARINFGAESEAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKVSTKFPIDVNRDEMPPVKVMQTAVIGTLGTLTYRLNLDGFPSSGWAFTYFAEIEELPPDESRKFRLVLPGQPDLSKAVVNIQENAQGKYRLYEPGYTNISLPFVLSFKFGKTTDSSRGPLVNAMEINKYLEKNDGSVDGGSIYSVASHLSSGDWAQEGGDPCLPVSWSWLRCNSDPQPTISSILLSSTNLTGNIPSDISKLTGLVELWLDGNMLTGPIPDLSGCVGLQIIHLENNQLRGEIPSSLANLPNLRELYLQNNQLSGKVPSGLIGGKLLLNYSGNIYLHKGSRQGNHVNIIIYSSLGAGVLLLAAMLFFLCICKERKQNYKDDQLLSLPTQKPVSSKNDARTDAAHCFSYSEIEDATNKFERKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQFIGFCRDEGNSILVYEFMHNGTLKEHLYSPLTHGQNINWINRLEIAEDAAKGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNENFGVNCRNIVQWAKLHIESGDIQGIIDPFLRNEYDIQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEKESETMRDLHSDNMSRHSIHSMNIGSLDLGGTDHYLSIDESIAQPTAR* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01653 925 SUPERFAMILY Protein kinase-like (PK-like) 584 873 IPR011009 -
Pte18g01653 925 SUPERFAMILY L domain-like 399 507 - -
Pte18g01653 925 Pfam Leucine Rich repeats (2 copies) 460 495 IPR025875 -
Pte18g01653 925 Pfam Malectin-like domain 33 361 IPR024788 -
Pte18g01653 925 Pfam Protein tyrosine and serine/threonine kinase 599 800 IPR001245 GO:0004672|GO:0006468
Pte18g01653 925 Gene3D Transferase(Phosphotransferase) domain 1 674 897 - -
Pte18g01653 925 Gene3D Phosphorylase Kinase; domain 1 570 673 - -
Pte18g01653 925 Gene3D Ribonuclease Inhibitor 375 520 IPR032675 -
Pte18g01653 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Pte18g01653 925 CDD STKc_IRAK 604 871 - -
Pte18g01653 925 PANTHER OS07G0107800 PROTEIN-RELATED 461 874 - -
Pte18g01653 925 SMART serkin_6 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01653 925 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 411 499 - -
Pte18g01653 925 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01653 925 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 674 883 - -
Pte18g01653 925 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Pte18g01653 925 FunFam Leucine-rich repeat receptor-like protein kinase 576 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01653 Pte-Chr18 27872125 27877880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01653 22 708 Receptor kinase-like Gene Family AT2G37050 67.914 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pte18g01653 Malectin_like 5.4e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01653 - - qsa:O6P43_006711 1493.02