Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01652 ATGGATACGGGGTTGGCTTCTAATGCTGATAAAGATGAATTATCAAATTCTTCATCAGATGAAAGAAGCCAAGACGTTTCAAGATCGTTAGGAACTAATGTAGAAGTGGGTTCCAAGGAATCAGCCTTCAGGAAGAATGGAACAAACGATGAAGCTGGACTAGAATTTGATCGTGATAAGAAGCGATTTGGTAGGGGACTGAGAAGGGAGGAAGATAGTCCTGAACAAGGTAATAGTCCCAATAAGTCTGCTAGGCTCTATCCTGCAAAGAATGTTGATCAAACAGAAGCAACCATGAGGAAAGCTCGTGTTTCTGTTCGAGCTCGCTCTGAGGCACCAATGATCATAGATGGTTGTCAATGGCGAAAGTATGGACAGAAGATGGCCAAGGGAAATTCGTGTCGCAGTCCAGTGAGAAAGCAAGAGGAATTTGTTTGTCACTTTGGGGCTTTGGACAACGTTGTTGAGAACAAGACTGGAGGTTGGCACTGTTGTTCACCTATAAGTAGCAGTGGCATGCAGCAATGTGGTAGGAGACAGAGACATGCACTTTTGTTCACCTCAAGTTTCCAACATTTCCAATTATAG 588 0.4354 MDTGLASNADKDELSNSSSDERSQDVSRSLGTNVEVGSKESAFRKNGTNDEAGLEFDRDKKRFGRGLRREEDSPEQGNSPNKSARLYPAKNVDQTEATMRKARVSVRARSEAPMIIDGCQWRKYGQKMAKGNSCRSPVRKQEEFVCHFGALDNVVENKTGGWHCCSPISSSGMQQCGRRQRHALLFTSSFQHFQL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01652 195 Gene3D WRKY domain 102 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01652 195 Pfam WRKY DNA -binding domain 117 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01652 195 SUPERFAMILY WRKY DNA-binding domain 108 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01652 195 MobiDBLite consensus disorder prediction 1 86 - -
Pte18g01652 195 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 9 134 IPR044810 GO:0003700
Pte18g01652 195 MobiDBLite consensus disorder prediction 44 76 - -
Pte18g01652 195 MobiDBLite consensus disorder prediction 20 36 - -
Pte18g01652 195 SMART WRKY_cls 115 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01652 Pte-Chr18 27870591 27871609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01652 10 141 WRKY Transcription Factor Family AT1G62300 44.444 4.88e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g01652 WRKY 0.0003 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01652 - - qsa:O6P43_028660 166.777