Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01651 ATGAAGAGGCCCCTACCTGCCAATGGAAAAATTGCCAAGGATGCTAAGGAGACCGTGGCGAGCGATAAGTGTCAGAGAGAGAAGCGGAAGACAATTAATGGTGATGATTTGCTATGGGCAATGGCTACTTTAGGTTTTGAGGATTATATCGATCCTCTCAAGATTTACCTTTCCAGATATAGAGAGGGTGACACCAAGAGTTCGGCAAAGAGTGGAGATACATCTACGAAAAAGGATGCTCAACAAAGTCCGAATCCACAGCTTGCTCATCAAGGGTACTTATCACAAGGTGTTGCTTTCACAAATTCTCAATTTAATATTTGGGTTGAAATGTTTGGTGGAATTGGAGGTTCTACTGCTCTGATTATTACCACACTCATTAAGTTGGTGAAAGGTTGA 399 0.4211 MKRPLPANGKIAKDAKETVASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREGDTKSSAKSGDTSTKKDAQQSPNPQLAHQGYLSQGVAFTNSQFNIWVEMFGGIGGSTALIITTLIKLVKG* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01651 132 SUPERFAMILY Histone-fold 1 80 IPR009072 GO:0046982
Pte18g01651 132 Gene3D Histone, subunit A 1 96 IPR009072 GO:0046982
Pte18g01651 132 MobiDBLite consensus disorder prediction 1 22 - -
Pte18g01651 132 MobiDBLite consensus disorder prediction 63 88 - -
Pte18g01651 132 MobiDBLite consensus disorder prediction 7 22 - -
Pte18g01651 132 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 83 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte18g01651 132 PRINTS CCAAT-binding transcription factor subunit A signature 24 42 - -
Pte18g01651 132 PRINTS CCAAT-binding transcription factor subunit A signature 43 61 - -
Pte18g01651 132 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01651 Pte-Chr18 27863283 27864933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01651 1 92 CCAAT-HAP3 Transcription Factor Family AT2G37060 69.369 1.02e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01651 K08065 - mnt:21407193 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01651 18 27863283 27864933 Pte18g01651 18 27863283 27864933 RCT