Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01650 ATGTACGGAAGCATCGGAGACAGACGGAGCAATAGTAATGGATGCGGGGTACCGACAACGAAGTCGATACCCGCAGAGGTGAAAGAGGATAGTGGGAGTTTTGCTCTGTCAATTGACTTCCAATACTTCAAGAAAATATGTGATGTCGAAGAATTTTACTCCATGTTGGAGGAGAAACCGAAGATCGCACTTTTGTGCGTGGGTGCCTCAGTTCACGAGGTTTTGTTGAACATATCGGAAAAACATATGCTGGTCGACGGTGCTAAAGTAAACATCCACCTACATAACTACCCGGAATCAATGATTGCTCTCAAGAATTTAAAAGCAGCATATATTGACAAACTAGTTTCTGTGCGTGGGACTGTAGTAAAAGTGAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGTGTCAAGTGTAAGCAACCAATTACCCGTATTTTCCCCGACGGGAAATTTTCTCCACCCGCTTCTTGTGGTTTTGGTGGCTGCAAGAGCAAAGTCTTTCAGCCAATGCGTCCCACTGCTGTGGCAACGGATTTTCAGAAAATAAGGCTACAAGAACTTTTGAAACCTGAAGACCACGAGGAAGGCCGGGTTCCTCGGACTGTTGAATGCGAACTCACCCTAGATCTTGTTGATGCATGCATACCTGGAGATGTGGTGACTGTCACAGGAATTATAAGAGGCATTAATACTTACATGGACATTGGAGGAGGAAAAGCGAAAAACAGAAGCCAGGGGTTCTACTACTTGTATATAGAAGCAGTTTCGATTAAAAATTCCAAGTCACTGACTACACCTGAGGAAATGCAAGATTCTAATCCCAAAGCCAGACCAACTGAGCTGCTTGATTTATTCTCATTTTCTTCAAGGGATTTAGAATTCATTGTCAAATTTTCAAAAGAACATGGCTCAGATTTATTCCGCCAAATTCTTCAATCTATTTGTCCTTCCATCTATGGCCATGAGCTTGTTAAAGCTGGGATAACTCTAGCACTATTTGGAGGTGTACGGAAGTATTCTACGGATCAGAATAAGGTCCCTGTGAGAGGGGACATTCATGTAATAGTTGTTGGTGATCCTGGATTGGGTAAGAGCCAACTACTACAAGCAGCAGCATCTGTTTCTCCTCGGGGTATCTATGTTTGTGGAAATGCTACAACCAAAGCTGGACTCACAGTAGCTGTCGTGAAGGATCCCACGACAAGTGACTATGCTTTTGAGGCTGGTGCAATGGTACTAGCTGACAGCGGGTTGTGCTGTATTGACGAGTTTGATAAAATGTCTTCAGAACATCAGGCCTTACTGGAGGCTATGGAACAACAATGTGTTTCAATTGCAAAAGCTGGCTTAGTAGCAAGTTTATCTGCTCGAACTTCGGTCTTGGCAGCTGCCAACCCTGTCGGTGGTCATTATAACCGCGCAAAAACTGTGAACGAAAATTTGAAAATGAGTGCCGCTCTCCTTTCCAGATTTGATCTGGTTTTTATTTTACTGGATAAACCTGATGAACTACTGGACAAGCGACTCTCCGAGCACATTATGTCACTTCATTCAGGTGCCGGAGAAGAATCAACAGCTGCAAAAAGGCGACGTGGAGATGTATCTTCTGCTTCGGGAATTGATGCATCACAGAATTCCGAAGGAACAGATGCAAGCATTGATTGCGGCTCTTTAGTTTCGAGATTGAGACTTCACCCACACCGAGACGCCAATTTTGTACCGTTGCCCAGTCAACTTCTTCGCAAATATATTGCTTATGCAAGAACTTATGTCTTTCCCAGGATGTACAAGCCAGCGGCAGAAATCTTGCAAAAATTTTACTTGAAACTGAGAGACCACAATACATCAGCTGATGGTACACCAATCACTGCAAGGCAACTGGAAAGTCTAGTAAGGCTGGCTGAAGCCCGAGCTCGCATAGATTTAAGAGAACAAATAACAGCGCAAGATGCTATGGATGTGGTTGAAATAATGAAAGAATCCCTTTACGACAAATACGTAGACGAGCATGGCTTTGTGGATTTTGGTCGAAGTGGGGGAATGAGCCGACAGAAAGAAGCAAAACGTTTTCTAGGTGCCCTTAATAAGCAATCAGAACTGCAGCAGAAGGATTGCTTTTCAATATCTGAGATATACAGTTTGGCCGATAGGATTGGGTTGCAAGTTCCTGACATCGACACATTTGTGGAAAACCTAAACAGCGTCGGTTATCTACTCAAAAAGGGGCCAAAGACGTATCAGGTTTTATCCTCATCTTACTCGCGCAGTCAATCTTCTAGATCAAGGAGCTGA 2304 0.4371 MYGSIGDRRSNSNGCGVPTTKSIPAEVKEDSGSFALSIDFQYFKKICDVEEFYSMLEEKPKIALLCVGASVHEVLLNISEKHMLVDGAKVNIHLHNYPESMIALKNLKAAYIDKLVSVRGTVVKVSTVRPLVVEMSFECVKCKQPITRIFPDGKFSPPASCGFGGCKSKVFQPMRPTAVATDFQKIRLQELLKPEDHEEGRVPRTVECELTLDLVDACIPGDVVTVTGIIRGINTYMDIGGGKAKNRSQGFYYLYIEAVSIKNSKSLTTPEEMQDSNPKARPTELLDLFSFSSRDLEFIVKFSKEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKYSTDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAASVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRLSEHIMSLHSGAGEESTAAKRRRGDVSSASGIDASQNSEGTDASIDCGSLVSRLRLHPHRDANFVPLPSQLLRKYIAYARTYVFPRMYKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARIDLREQITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSRQKEAKRFLGALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDTFVENLNSVGYLLKKGPKTYQVLSSSYSRSQSSRSRS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01650 767 PRINTS Mini-chromosome maintenance (MCM) protein family signature 491 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 PRINTS Mini-chromosome maintenance (MCM) protein family signature 440 453 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 PRINTS Mini-chromosome maintenance (MCM) protein family signature 353 368 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 PRINTS Mini-chromosome maintenance (MCM) protein family signature 464 476 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 PRINTS Mini-chromosome maintenance (MCM) protein family signature 413 427 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 Gene3D - 104 233 IPR012340 -
Pte18g01650 767 ProSiteProfiles MCM family domain profile. 310 517 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 Pfam MCM OB domain 104 232 IPR033762 -
Pte18g01650 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 672 IPR027417 -
Pte18g01650 767 SMART AAA_5 354 506 IPR003593 GO:0016887
Pte18g01650 767 CDD MCM8 314 665 - -
Pte18g01650 767 Pfam MCM P-loop domain 307 521 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 MobiDBLite consensus disorder prediction 1 19 - -
Pte18g01650 767 SMART mcm 100 667 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 SUPERFAMILY Nucleic acid-binding proteins 35 234 IPR012340 -
Pte18g01650 767 MobiDBLite consensus disorder prediction 524 554 - -
Pte18g01650 767 MobiDBLite consensus disorder prediction 1 21 - -
Pte18g01650 767 Gene3D - 288 675 IPR027417 -
Pte18g01650 767 CDD MCM8_WHD 688 753 - -
Pte18g01650 767 Pfam MCM AAA-lid domain 583 666 IPR041562 -
Pte18g01650 767 Coils Coil 425 445 - -
Pte18g01650 767 Gene3D - 131 181 - -
Pte18g01650 767 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 37 701 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g01650 767 FunFam DNA helicase MCM8 isoform X1 131 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01650 Pte-Chr18 27849926 27857813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01650 21 753 Core DNA Replication Machinery Family AT3G09660 73.161 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01650 K10737 - qsa:O6P43_010333 1231.47