Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01644 ATGGCGCGGAGGGTAATAAGCGTCGGTCAATCTGAAGGTTCAAGAAAAATCCGTATTGAGAGATGTACGGAAGCATCGGAGACAGACGGAGCAATAGTAATGGATGCGGGGTACCGACAACGAAGTCGATACCCGCAGAGTCCATATGGTCGATCCCTAGCTTCTCAGGTGAAAGAGGATAGTGGGAGTTTTGCTCTGTCAATTGACTTCCAATACTTCAAGAAAATATGTGATGTCGAAGAATTTTACTCCATGTTAGAGGAGAAACCGAAGATCGCACTTTTATGCGTGGGTGCCTCAGTTCACGAGGTTTTGTTGAACATATCGGAAAAACATATGCTGGTCGACGGTGCTAAAGTAAACATCCACCTACATAACTACCCGGAATCAATGATTGCTCTCAAGAATTTAAAAGCAGCATATATTGACAAACTAGTTTCTGTGCGTGGGACTGTAGTAAAAGTGAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGTGTCAAGTGTAAGCAACCAATTACCCGTATTTTCCCCGACGGGAAATTTTCTCCACCCCCTTCTTGTGGTTTTGGTGGCTGCAAGAGCAAAGTCTTTCAGCCAATGCGTCCCACTGCTGTGGCAACGGATTTTCAGAAAATAAGGCTACAAGAACTTTTGAAACCTGAAGACCACGAGGAAGGCCGGGTTCCTCGGACTGTTGAATGCGAACTCACCCTAGATCTTGTTGACGCATGCATACCTGGAGATGTGGTGACTGTCACAGGAATTATAAGAGGCATTAATACTTACATGGACATTGGAGGAGGAAAAGCGAAAAACAGAAGCCAGGGGTTCTACTACTTGTATATAGAAGCAGTTTCGATTAAAAATTCCAAGTCACTGACTACACCTGAGGAAATGCAAGATTCTAATCCCAAAGCCAGACCAACTGAGCTGCTTGATTTATTCTCATTTTCTTCAAGGGATTTAGAATTCATTGTCAAATTTTCAAAAGAACATGGCTCAGATTTATTCCGCCAAATTCTTCAATCTATTTGTCCTTCCATCTATGGCCATGAGCTTGTTAAAGCTGGGATAACTCTAGCACTATTTGGAGGTGTACGGAAGTATTCTACGGATCAGAATAAGGTCCCTGTGAGAGGGGACATTCATGTAATAGTTGTTGGTGATCCTGGATTGGGTAAGAGCCAACTACTACAAGCAGCAGCATCTGTTTCTCCTCGGGGTATCTATGTTTGTGGAAATGCTACAACGAAAGCTGGACTCACAGTAGCTGTCGTGAAGGATCCCACGACAAGTGACTATGCTTTTGAGGCTGGTGCAATGGTACTAGCTGACAGCGGGTTGTGCTGTATTGACGAGTTTGATAAAATGTCTTCAGAACATCAGGCCTTACTGGAGGCTATGGAACAACAATGTGTTTCAATTGCAAAAGCTGGCTTAGTAGCAAGTTTATCTGCTCGAACTTCGGTCTTGGCAGCTGCCAACCCTGTCGGTGGTCATTATAACCGCGCAAAAACTGTGAACGAAAATTTGAAAATGAGTGCCGCTCTCCTTTCCAGATTTGATCTGGTTTTTATTTTACTGGATAAACCTGATGAACTACTGGACAAGCGACTCTCCGAGCACATTATGTCACTTCATTCAGGTGCCGGAGAAGAATCAACAGCTGCAAAAAGGCGACGTGGAGATGTATCTTCTGCTTCGGGAATTGATGCATCACAGAATTCCGAAGGAACAGATGCAAGCATTGATTGCGGCTCTTTAGTTTCGAGATTGAGACTTCACCCACACCGAGACGCCAATTTTGTACCGTTGCCCAGTCAACTTCTTCGCAAATATATTGCTTATGCAAGAACTTATGTCTTTCCCAGGATGTACAAGCCAGCGGCAGAAATCTTGCAAAAATTTTACTTGAAACTGAGAGACCACAATACATCAGCTGATGGTACACCAATCACTGCAAGGCAACTGGAAAGTCTAGTAAGGCTGGCTGAAGCCCGAGCTCGCATAGATTTAAGAGAACAAATAACAGCGCAAGATGCTATGGATGTGGTTGAAATAATGAAAGAATCCCTTTACGACAAATACGTAGACGAGCATGGCTTTGTGGATTTTGGTCGAAGTGGGGGAATGAGCCGACAGAAAGAAGCAAAACGTTTTCTAGGTGCCCTTAATAAGCAATCAGAACTGCAGCAGAAGGATTGCTTTTCAATATCTGAGATATACAGTTTGGCCGATAGGATTGGGTTGCAAGTTCCTGACATCGACACATTTGTGGAAAACCTAAACAGCGTCGGTTATCTACTCAAAAAGGGGCCAAAGACGTATCAGGTTTTATCCTCATCTTACTCGCGCAGTCAATCTTCTAGATCAAGGAGCTGA 2394 0.4382 MARRVISVGQSEGSRKIRIERCTEASETDGAIVMDAGYRQRSRYPQSPYGRSLASQVKEDSGSFALSIDFQYFKKICDVEEFYSMLEEKPKIALLCVGASVHEVLLNISEKHMLVDGAKVNIHLHNYPESMIALKNLKAAYIDKLVSVRGTVVKVSTVRPLVVEMSFECVKCKQPITRIFPDGKFSPPPSCGFGGCKSKVFQPMRPTAVATDFQKIRLQELLKPEDHEEGRVPRTVECELTLDLVDACIPGDVVTVTGIIRGINTYMDIGGGKAKNRSQGFYYLYIEAVSIKNSKSLTTPEEMQDSNPKARPTELLDLFSFSSRDLEFIVKFSKEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKYSTDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAASVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRLSEHIMSLHSGAGEESTAAKRRRGDVSSASGIDASQNSEGTDASIDCGSLVSRLRLHPHRDANFVPLPSQLLRKYIAYARTYVFPRMYKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARIDLREQITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSRQKEAKRFLGALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDTFVENLNSVGYLLKKGPKTYQVLSSSYSRSQSSRSRS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01644 797 Gene3D - 161 211 - -
Pte18g01644 797 Pfam MCM AAA-lid domain 613 696 IPR041562 -
Pte18g01644 797 Coils Coil 455 475 - -
Pte18g01644 797 CDD MCM8_WHD 718 783 - -
Pte18g01644 797 MobiDBLite consensus disorder prediction 554 584 - -
Pte18g01644 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 702 IPR027417 -
Pte18g01644 797 Pfam MCM P-loop domain 337 551 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 Gene3D - 318 705 IPR027417 -
Pte18g01644 797 ProSiteProfiles MCM family domain profile. 340 547 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 Gene3D - 134 263 IPR012340 -
Pte18g01644 797 Pfam MCM OB domain 134 262 IPR033762 -
Pte18g01644 797 SMART mcm 130 697 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 494 506 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 443 457 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 521 529 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 383 398 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 PRINTS Mini-chromosome maintenance (MCM) protein family signature 470 483 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 SUPERFAMILY Nucleic acid-binding proteins 49 264 IPR012340 -
Pte18g01644 797 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 65 731 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g01644 797 SMART AAA_5 384 536 IPR003593 GO:0016887
Pte18g01644 797 FunFam DNA helicase MCM8 isoform X1 161 211 - -
Pte18g01644 797 CDD MCM8 344 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01644 Pte-Chr18 27783518 27793040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01644 44 783 Core DNA Replication Machinery Family AT3G09660 73.144 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01644 K10737 - qsa:O6P43_010333 1238.02