Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g01644 | ATGGCGCGGAGGGTAATAAGCGTCGGTCAATCTGAAGGTTCAAGAAAAATCCGTATTGAGAGATGTACGGAAGCATCGGAGACAGACGGAGCAATAGTAATGGATGCGGGGTACCGACAACGAAGTCGATACCCGCAGAGTCCATATGGTCGATCCCTAGCTTCTCAGGTGAAAGAGGATAGTGGGAGTTTTGCTCTGTCAATTGACTTCCAATACTTCAAGAAAATATGTGATGTCGAAGAATTTTACTCCATGTTAGAGGAGAAACCGAAGATCGCACTTTTATGCGTGGGTGCCTCAGTTCACGAGGTTTTGTTGAACATATCGGAAAAACATATGCTGGTCGACGGTGCTAAAGTAAACATCCACCTACATAACTACCCGGAATCAATGATTGCTCTCAAGAATTTAAAAGCAGCATATATTGACAAACTAGTTTCTGTGCGTGGGACTGTAGTAAAAGTGAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGTGTCAAGTGTAAGCAACCAATTACCCGTATTTTCCCCGACGGGAAATTTTCTCCACCCCCTTCTTGTGGTTTTGGTGGCTGCAAGAGCAAAGTCTTTCAGCCAATGCGTCCCACTGCTGTGGCAACGGATTTTCAGAAAATAAGGCTACAAGAACTTTTGAAACCTGAAGACCACGAGGAAGGCCGGGTTCCTCGGACTGTTGAATGCGAACTCACCCTAGATCTTGTTGACGCATGCATACCTGGAGATGTGGTGACTGTCACAGGAATTATAAGAGGCATTAATACTTACATGGACATTGGAGGAGGAAAAGCGAAAAACAGAAGCCAGGGGTTCTACTACTTGTATATAGAAGCAGTTTCGATTAAAAATTCCAAGTCACTGACTACACCTGAGGAAATGCAAGATTCTAATCCCAAAGCCAGACCAACTGAGCTGCTTGATTTATTCTCATTTTCTTCAAGGGATTTAGAATTCATTGTCAAATTTTCAAAAGAACATGGCTCAGATTTATTCCGCCAAATTCTTCAATCTATTTGTCCTTCCATCTATGGCCATGAGCTTGTTAAAGCTGGGATAACTCTAGCACTATTTGGAGGTGTACGGAAGTATTCTACGGATCAGAATAAGGTCCCTGTGAGAGGGGACATTCATGTAATAGTTGTTGGTGATCCTGGATTGGGTAAGAGCCAACTACTACAAGCAGCAGCATCTGTTTCTCCTCGGGGTATCTATGTTTGTGGAAATGCTACAACGAAAGCTGGACTCACAGTAGCTGTCGTGAAGGATCCCACGACAAGTGACTATGCTTTTGAGGCTGGTGCAATGGTACTAGCTGACAGCGGGTTGTGCTGTATTGACGAGTTTGATAAAATGTCTTCAGAACATCAGGCCTTACTGGAGGCTATGGAACAACAATGTGTTTCAATTGCAAAAGCTGGCTTAGTAGCAAGTTTATCTGCTCGAACTTCGGTCTTGGCAGCTGCCAACCCTGTCGGTGGTCATTATAACCGCGCAAAAACTGTGAACGAAAATTTGAAAATGAGTGCCGCTCTCCTTTCCAGATTTGATCTGGTTTTTATTTTACTGGATAAACCTGATGAACTACTGGACAAGCGACTCTCCGAGCACATTATGTCACTTCATTCAGGTGCCGGAGAAGAATCAACAGCTGCAAAAAGGCGACGTGGAGATGTATCTTCTGCTTCGGGAATTGATGCATCACAGAATTCCGAAGGAACAGATGCAAGCATTGATTGCGGCTCTTTAGTTTCGAGATTGAGACTTCACCCACACCGAGACGCCAATTTTGTACCGTTGCCCAGTCAACTTCTTCGCAAATATATTGCTTATGCAAGAACTTATGTCTTTCCCAGGATGTACAAGCCAGCGGCAGAAATCTTGCAAAAATTTTACTTGAAACTGAGAGACCACAATACATCAGCTGATGGTACACCAATCACTGCAAGGCAACTGGAAAGTCTAGTAAGGCTGGCTGAAGCCCGAGCTCGCATAGATTTAAGAGAACAAATAACAGCGCAAGATGCTATGGATGTGGTTGAAATAATGAAAGAATCCCTTTACGACAAATACGTAGACGAGCATGGCTTTGTGGATTTTGGTCGAAGTGGGGGAATGAGCCGACAGAAAGAAGCAAAACGTTTTCTAGGTGCCCTTAATAAGCAATCAGAACTGCAGCAGAAGGATTGCTTTTCAATATCTGAGATATACAGTTTGGCCGATAGGATTGGGTTGCAAGTTCCTGACATCGACACATTTGTGGAAAACCTAAACAGCGTCGGTTATCTACTCAAAAAGGGGCCAAAGACGTATCAGGTTTTATCCTCATCTTACTCGCGCAGTCAATCTTCTAGATCAAGGAGCTGA | 2394 | 0.4382 | MARRVISVGQSEGSRKIRIERCTEASETDGAIVMDAGYRQRSRYPQSPYGRSLASQVKEDSGSFALSIDFQYFKKICDVEEFYSMLEEKPKIALLCVGASVHEVLLNISEKHMLVDGAKVNIHLHNYPESMIALKNLKAAYIDKLVSVRGTVVKVSTVRPLVVEMSFECVKCKQPITRIFPDGKFSPPPSCGFGGCKSKVFQPMRPTAVATDFQKIRLQELLKPEDHEEGRVPRTVECELTLDLVDACIPGDVVTVTGIIRGINTYMDIGGGKAKNRSQGFYYLYIEAVSIKNSKSLTTPEEMQDSNPKARPTELLDLFSFSSRDLEFIVKFSKEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKYSTDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAASVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRLSEHIMSLHSGAGEESTAAKRRRGDVSSASGIDASQNSEGTDASIDCGSLVSRLRLHPHRDANFVPLPSQLLRKYIAYARTYVFPRMYKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARIDLREQITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSRQKEAKRFLGALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDTFVENLNSVGYLLKKGPKTYQVLSSSYSRSQSSRSRS* | 798 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g01644 | 797 | Gene3D | - | 161 | 211 | - | - | |
Pte18g01644 | 797 | Pfam | MCM AAA-lid domain | 613 | 696 | IPR041562 | - | |
Pte18g01644 | 797 | Coils | Coil | 455 | 475 | - | - | |
Pte18g01644 | 797 | CDD | MCM8_WHD | 718 | 783 | - | - | |
Pte18g01644 | 797 | MobiDBLite | consensus disorder prediction | 554 | 584 | - | - | |
Pte18g01644 | 797 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 350 | 702 | IPR027417 | - | |
Pte18g01644 | 797 | Pfam | MCM P-loop domain | 337 | 551 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | Gene3D | - | 318 | 705 | IPR027417 | - | |
Pte18g01644 | 797 | ProSiteProfiles | MCM family domain profile. | 340 | 547 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | Gene3D | - | 134 | 263 | IPR012340 | - | |
Pte18g01644 | 797 | Pfam | MCM OB domain | 134 | 262 | IPR033762 | - | |
Pte18g01644 | 797 | SMART | mcm | 130 | 697 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 494 | 506 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 443 | 457 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 521 | 529 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 383 | 398 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 470 | 483 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | SUPERFAMILY | Nucleic acid-binding proteins | 49 | 264 | IPR012340 | - | |
Pte18g01644 | 797 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 65 | 731 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g01644 | 797 | SMART | AAA_5 | 384 | 536 | IPR003593 | GO:0016887 | |
Pte18g01644 | 797 | FunFam | DNA helicase MCM8 isoform X1 | 161 | 211 | - | - | |
Pte18g01644 | 797 | CDD | MCM8 | 344 | 695 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g01644 | Pte-Chr18 | 27783518 | 27793040 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g01644 | 44 | 783 | Core DNA Replication Machinery Family | AT3G09660 | 73.144 | 0.0 | 1115 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g01644 | K10737 | - | qsa:O6P43_010333 | 1238.02 |