Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01639 ATGGGGAGGAAGGGGCATTGGTTTTCGTCAGTAAAGAAAGCTCTAAACTCTGAATCGAAGGAGAAGAAAGACCAGAAATCAAATAAATCAAAGACAAAATGGTTTGGGAAGCAAAACTTACTGGCTTCAGAGTATTACTCAGGGAGTGTCTCTGCTCCTCCTCCTGTGCAGCCACCTCCTGCTACTCCCAAGTCAGAAGAGATAAACTTGATTCATGTAGAAAAAGAAAACAGCAACGTCGCAATTGAAACAACTGCTTATGTTGAGAAAGCTATAGCTGTTGCTGCTGCACCAGTAGCTTCAATAGCAGTTCAACCTGCTAAATTCTCCAAATATGTAGGCAAAGACAAGGACGAAAAAGCGGCAACAAAGATTCAAACAGCTTTTCGGGGATATTTGGCAAGAAGAGCATTGAGAGCTTTAAGAGGGCTTGATAGGCTCAAATCACTGATGGAAGGGCCATATGTGAGACGTCAAGCTATTAGTACCCTCAAATCCATGCAGACTTTATCTCGTGTACAATCTCAGATACATTCTAGAAGGATCAGAATGCTAGAGGAGAATAAGGCTCTGCAGAAGCAACTATTACAAAAGCACGCAAAAGAGCTCGAGAGTATGCGGATAGAAGAGGAATGGGATGACAGCTTGCAATCAAAGGAACAAATTGAAGCAAAGCTGCTAAACAAATATGAGTCTGCCATGAGAAGAGAACGGGCTTTAGCTTATGCATTCACTCATCAGCAAAGTGGGAAGAATTCATTTCGATCAATGAACCCCATGTTCATGGATCCAACCAATCCTAGCTGGGGCTGGAGCTGGTTGGAACGATGGGCGGCTGCCCGTCCTTGGGAGAGTCGTAAGATGGAGAAAGAACTAAACAATGACAATTCGTCTCAGAAGAGTACTGTGAACGACAGTATTGGTGGAGGCGAAATCACCAAGTCATACGCTCGCTATCAACTTAATTCTGACAAGTTTTCGCCATCGTCCAGCCAAACGGCAACCTCTCCTCGCATTCCGTCACATTCTACTAGAATACTTGCCAAAAAGATGAAGTCAGCAAGTCCAAAGAACGGCCTAGTTTCAGATGATGACTCCAAAAGTGCGGTGAGCGTAAAATCTGAACGATACCGGAGGCATTCCATTGGTGCATCATCAGTCAGAGATGATGAGAGCCTTGCAAGCTCTCAAGCAGTTCCAAGTTACATGGTTCCAACTCAGTCTGCAAAAGCCAAATCAAGAATGCAAAGTCCATTAGCCACAGACAGTGTGCTTTCGGAGAGTAGTAGTTCACTTGGAACTGCAAAGAAAAGGCTCTCTTTCCCGCCTTCACCAGCTAAGCCTAGGCGCCATTCAGTTCCACCAAAGTTAGAAAGCAGCTTGAATTCTGAACTGAGCCTTGGCCATTGA 1410 0.4461 MGRKGHWFSSVKKALNSESKEKKDQKSNKSKTKWFGKQNLLASEYYSGSVSAPPPVQPPPATPKSEEINLIHVEKENSNVAIETTAYVEKAIAVAAAPVASIAVQPAKFSKYVGKDKDEKAATKIQTAFRGYLARRALRALRGLDRLKSLMEGPYVRRQAISTLKSMQTLSRVQSQIHSRRIRMLEENKALQKQLLQKHAKELESMRIEEEWDDSLQSKEQIEAKLLNKYESAMRRERALAYAFTHQQSGKNSFRSMNPMFMDPTNPSWGWSWLERWAAARPWESRKMEKELNNDNSSQKSTVNDSIGGGEITKSYARYQLNSDKFSPSSSQTATSPRIPSHSTRILAKKMKSASPKNGLVSDDDSKSAVSVKSERYRRHSIGASSVRDDESLASSQAVPSYMVPTQSAKAKSRMQSPLATDSVLSESSSSLGTAKKRLSFPPSPAKPRRHSVPPKLESSLNSELSLGH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01639 469 MobiDBLite consensus disorder prediction 323 342 - -
Pte18g01639 469 Coils Coil 182 202 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 388 437 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 290 309 - -
Pte18g01639 469 Pfam IQ calmodulin-binding motif 119 139 IPR000048 GO:0005515
Pte18g01639 469 Gene3D - 108 146 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 323 469 - -
Pte18g01639 469 SMART iq_5 117 139 IPR000048 GO:0005515
Pte18g01639 469 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Pte18g01639 469 MobiDBLite consensus disorder prediction 15 31 - -
Pte18g01639 469 PANTHER IQ-DOMAIN 5-RELATED 1 454 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 368 386 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 1 35 - -
Pte18g01639 469 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01639 Pte-Chr18 27740630 27745290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01639 1 459 IQD Protein Family AT5G03040 51.139 8.81e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01639 - - gmx:100800080 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01639 18 27740630 27745290 Pte18g01639 18 27740630 27745290 RCT