Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01633 ATGGCGGATTCTGATTTTGGTGACAAAGTCCCTCCTGCTTTTGACCGTATGGGAAATGCTATCAAGGATTCTGACGTTAGGGGGTTCAACCCGGGACTAATAGTCCTACTGCTTGTGGGAGGTTTGCTGTTGGCGTTCCTTATTGGGAATTATGTACTTTACATATATGCAAAGAAGAACCTTCCTCCGAGGAAAAAGAAGTCAGTCTCAAAAAAGAAGATGAAGAGACAGAGACTGAAGCAGGGTGTCTCCGCACCTGGAGAGTAG 267 0.4569 MADSDFGDKVPPAFDRMGNAIKDSDVRGFNPGLIVLLLVGGLLLAFLIGNYVLYIYAKKNLPPRKKKSVSKKKMKRQRLKQGVSAPGE* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01633 88 PANTHER DNA-BINDING PROTEIN S1FA2 3 88 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pte18g01633 88 MobiDBLite consensus disorder prediction 63 79 - -
Pte18g01633 88 MobiDBLite consensus disorder prediction 63 88 - -
Pte18g01633 88 Pfam DNA binding protein S1FA 24 88 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01633 Pte-Chr18 27719683 27721564 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pte18g01633 S1FA 2.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01633 - - ming:122080659 129.028