Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01624 ATGGGTATGCATATCCAAATGCTCCACAGTTTTTCAGGATTCTCTCGATCTCTCATCCTTGTTGCTGTTCTTTTAGTTGTGTATTCCAATGGTGTATCCGGGTTTGGATCGATGGGACCAATCTCAGCCGCGTTCGGTGAGGACGAGTTTTTCTGTGCCATTGATGCCAGTGGCAGGCAGGATGTTGTTTGCTGGGGAAAGAACAGTTCTTTATCATCTACTTCATCATCGTCTTCCTCGAATTCAGGCTATTTCGACGAGATTCCTGCCATTGCAGCTCTCTCTGGTGGAGAAGGATTCATCTGTGGCATCTTGGCCAATACTTCACAAGCCTACTGCTGGAGCTTGACTAGACCGGGTATAGATCTTGTGCCGTCAATTTATCAAAACACTGCTTATTCTCAAATTGCGGCAGGCAAGAATCATGTCTGTGCTATTAGAGGAACCTATTATTCTGGCCACGATTCGAGCTCCATTGATTGCTGGGAAATCGTGAAAACTCGAAACAGTACTCTGAGTTCAAGGGAAAATCCTCTGTTCTATTATCAGACCATTGGCAACCTCCCGCTGAGCAAGGTTGTCTCTGGAGATGGATTTAGCTGTGGTAGTACAAGAGAAGGAGGACTTGTCTGTTGGGGACCCAATTCTTCGATTATAGGAGCTGCAAATGTATCAGAAAGTTTTGTATCTTTAGCTTCAGCAAGAAGTACAGTTTGTGGGATTCTGCAGATTTCAGGGGAGCTGAAATGTTGGGGTGAATCTGCTTCTCCACCATCTTCAAGTCAATTTGTGTCTTTGACTGCTGGAGCTCATCATTTTTGTGGCATCCGTGCTGATAATCATGGGGTTTCATGTTGGGGGAGTCTCAACTCGTCTTCTGTTCCAAGGGGTCCTGGTTTCATGGCAATTGCTTCATCGGATTACACTACTTGTGGTGTAAGGGAAGATGATCTGTTGCTTGGTTGCTGGACTATTGATGGATCCTCACCACCAATATTTGATCCTCCATTGGAATTGTGCAGTCCAGGTCTCTGTAGTGCAAATGTTTGTGGTGAAGGAAACTTTAAATTCAATGCCAGCATACTCAATGAACCAGATTTGACAAGCCTTTGTGTTAGGAAAGATTTGAAAATCTGCTCCCCTTGTGGATCAAATTGTTCGGAGGGTTTCTTCTTGTCCAGTCCATGCAGTGTCAATGCAGACAGAGTCTGTACTGTTTGTTCTCTTTGCCAAAACAGTTCATGCTGGGATGTCTGTAAGCTTCAATCATATCCAGAGATGCAACGGAAGCATTGGCATTCTATCCTCAGCATTATTATCGTTGCTGGATCCTCTACTTTGGGTTTACTCTTATTTCTGTTGGCTTGTTGCTTCTTACCACGTATACTAGCTGTAGGAAATGAAAAGGGAATAAAGACGAGGTCAAAATCTTTTGAGAGTGATATGAATAGCGATTCTCTCCTTGCCAGGGCTGTGGTTCCTTGTCCTGGGGCAGCTCAGATTTTCAGACTAACAGAACTTAAAGATGCAACCAATGGATTTAAGGAATTTAATGAGCTTGGTAGAGGAAGTTATGGTTTTGTTTACAAAGCTATCCTTGCAGATGGGAGGGTGGTTGCTGTGAAGAGGGCCAATGCTACTACTATAATTCACACTAACAACCGCGAATTCGAAATGGATCTGGAAATTCTTTGCAATCTCAGGCATTGTAACATAGTGAACTTGTTGGGATACTCTTTGGAGATGGGAGAGAGGCTGCTAGTTTACGAGTATATGCCTCATGGAACACTTAATGACCACCTTCACGGTGGCCTTTCTCCTCTTAATTGGAATATGAGATTGAGGATTTCAGTGCAGGCAGCTAAGGGACTTGAGTACCTTCACAAGGAAGTTATGCCGCCTATTGTTCACATGGATGTCAAGTCTTCAAACATTCTTTTGGATTCTGAGTGGGGAGCAAGAATTGCAGACTTTGGACTCTTTACTTCAAATGAAAAAGATCCCGGCATGGACTTCGAAAGAGATGTGTACAACTTTGGAGTGGTACTGCTAGAAATTCTAAGTGGAAAGAAACCTTATGACAGAGATTGTATGCCTACAGATATAGTTGACTGGGCAGTGCCTCTCATTAAGCAGGGCAAAACAGCTGCCATTTTCGACAGGTCTGTAGCTCTTCCAAGGAATGTTGAACCTCTACTTAAGCTTGCAGATATAGCAGAGCTTGCTGAAGCGGTGGTGGCAATAATCACCGGAGACAGTCGGCGGAGTCACCCACCACCCCAACCACCTGTAACGCCTCAGTCTGAAATCCAAACGAATCGATTTGTATTTGCCGCAGCTACACCCTACCCATCACAAAATCCGGACCCAAATGCTCCACCGTATTATCAGTTTCCGAGTTACTACCAACCATCTCATCCGACTCTGCCGGTACGTCTACCAGCTCTGTTTGATCGCCATCATCGGTCTCAGGTAGACCCACCATCACATGCCAACTGGATAGCTGGAAGGTACCCTTGTGGGTCTGTTATCACTATGCATGTAACCTTTGTTGATCATCAGAAAGCGGTTACTATAAGAAACGACGTGAATCTTAAGAAGGAGACACTGAGAATGGAGCCCGATGATGAACATCCTGGACATTTCCTCGTTGCCTTCACGTTTGAGCCACTGTCGATGGCAGTGAAGGCAGAGGCTCCTCCAGTCAAACAGGATGGATCGGATGATGCCACAATTCCTGATATCCCAAATCCTCAAATAACACGAGCAATGTTTGAGAAAGAGAAGGGTGGATACCATGTGAAGGTAATGAAGCAGATTTTGTTGGTCAATAAGATGAGGTATGAGTTGCAGGAGATATATGGAATTGGGAATTCAATAGAGAATGGCACTGATGTAAGTGACACTGGCAAAGAATGTATTATTTGCTTGTCTGAACCTCGCGACACTACTGTCCTCCCTTGCAGACGCATGTCGCTGTTTGCCAGGAAGTGGGAAGACGACGTGTTACCTCCATTATATGGCCGACCAGAAACCATAGGAGTTTCGATTCTCAAGTCGGTGGCAGTCAGTTTATTGTTGTACCCAAATCTTGATGCATAA 3102 0.4465 MGMHIQMLHSFSGFSRSLILVAVLLVVYSNGVSGFGSMGPISAAFGEDEFFCAIDASGRQDVVCWGKNSSLSSTSSSSSSNSGYFDEIPAIAALSGGEGFICGILANTSQAYCWSLTRPGIDLVPSIYQNTAYSQIAAGKNHVCAIRGTYYSGHDSSSIDCWEIVKTRNSTLSSRENPLFYYQTIGNLPLSKVVSGDGFSCGSTREGGLVCWGPNSSIIGAANVSESFVSLASARSTVCGILQISGELKCWGESASPPSSSQFVSLTAGAHHFCGIRADNHGVSCWGSLNSSSVPRGPGFMAIASSDYTTCGVREDDLLLGCWTIDGSSPPIFDPPLELCSPGLCSANVCGEGNFKFNASILNEPDLTSLCVRKDLKICSPCGSNCSEGFFLSSPCSVNADRVCTVCSLCQNSSCWDVCKLQSYPEMQRKHWHSILSIIIVAGSSTLGLLLFLLACCFLPRILAVGNEKGIKTRSKSFESDMNSDSLLARAVVPCPGAAQIFRLTELKDATNGFKEFNELGRGSYGFVYKAILADGRVVAVKRANATTIIHTNNREFEMDLEILCNLRHCNIVNLLGYSLEMGERLLVYEYMPHGTLNDHLHGGLSPLNWNMRLRISVQAAKGLEYLHKEVMPPIVHMDVKSSNILLDSEWGARIADFGLFTSNEKDPGMDFERDVYNFGVVLLEILSGKKPYDRDCMPTDIVDWAVPLIKQGKTAAIFDRSVALPRNVEPLLKLADIAELAEAVVAIITGDSRRSHPPPQPPVTPQSEIQTNRFVFAAATPYPSQNPDPNAPPYYQFPSYYQPSHPTLPVRLPALFDRHHRSQVDPPSHANWIAGRYPCGSVITMHVTFVDHQKAVTIRNDVNLKKETLRMEPDDEHPGHFLVAFTFEPLSMAVKAEAPPVKQDGSDDATIPDIPNPQITRAMFEKEKGGYHVKVMKQILLVNKMRYELQEIYGIGNSIENGTDVSDTGKECIICLSEPRDTTVLPCRRMSLFARKWEDDVLPPLYGRPETIGVSILKSVAVSLLLYPNLDA* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01624 1033 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Pte18g01624 1033 FunFam serine/threonine-protein kinase-like protein CCR1 483 591 - -
Pte18g01624 1033 SMART serkin_6 514 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01624 1033 Gene3D Phosphorylase Kinase; domain 1 476 591 - -
Pte18g01624 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pte18g01624 1033 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 17 740 - -
Pte18g01624 1033 Gene3D - 28 179 IPR009091 -
Pte18g01624 1033 Gene3D - 180 332 IPR009091 -
Pte18g01624 1033 ProSiteProfiles Protein kinase domain profile. 514 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01624 1033 Gene3D Transferase(Phosphotransferase) domain 1 670 747 - -
Pte18g01624 1033 Gene3D Transferase(Phosphotransferase) domain 1 592 669 - -
Pte18g01624 1033 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 349 404 IPR001368 GO:0005515
Pte18g01624 1033 SUPERFAMILY Protein kinase-like (PK-like) 497 734 IPR011009 -
Pte18g01624 1033 SUPERFAMILY RCC1/BLIP-II 39 291 IPR009091 -
Pte18g01624 1033 Pfam Protein kinase domain 514 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01624 Pte-Chr18 27660028 27665669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01624 8 739 Receptor kinase-like Gene Family AT3G59420 31.514 3.83e-103 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte18g01624 Pkinase 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01624 - - cave:132161645 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01624 18 27660028 27665669 Pte18g01624 18 27660028 27665669 RCT