Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g01623 | ATGTCAAAACGCATGGAAGTAGGAGCACCAAGCCAAGGTGAAATAACTGGCAAGGACTATCAAGACCCAGCGCCAGCACCACTCATAGATGCAGAGGAATTTACCAAATGGTCGTTCTACAGAGCCATCATTGCTGAATTCATAGCCACCCTCTTGTTCTTGTATATCACAGTTTTGACCGTGATTGGTTACAAAAGCCAGTCTGACACAAAGGCTGGCGGTGACCAGTGTGGCGGAGTGGGCCTCCTCGGCATCGCTTGGGCCTTCGGCGGTATGATCTTCATTCTCGTCTACTGCACTGCTGGTATCTCTGGAGGGCACATCAACCCGGCAGTAACATTTGGGTTGTTCTTGGCAAGGAAGGTGTCGCTGGTTAGAGCTGTAATGTACATGGTCGCTCAGTGCTTGGGGGCCGTATGTGGGTGTGGACTGGTGAAGGCCTTCCAGAGCGCTTATTACAAGAGGTATGGGGGTGGTGCCAACGAGCTTGCTGGTGGCTATAGCAAAGGCACTGGGTTGGGAGCTGAGATCATCGGTACCTTTGTTCTAGTCTATACCGTCTTCTCAGCTACGGATCCCAAGAGAAACGCCAGGGATTCGCATGTTCCTGTGTTGGCACCCCTTCCAATTGGGTTCGCCGTCTTCATGGTTCACCTTGCTACCATCCCCGTCACTGGCACTGGCATCAACCCTGCTAGAAGTTTTGGAGCTGCAGTGATATATAACGACAGGAAGGCCTGGAATGATCATTGGATTTTCTGGGTTGGACCTTTCATTGGTGCTGCCGTTGCCGCATTCTACCACCAGTATATACTGAGAGCTGCAGCCTTGAAAGCTGTGGGATCTTTCAGGAGCTCCTCCAACATATGA | 870 | 0.5138 | MSKRMEVGAPSQGEITGKDYQDPAPAPLIDAEEFTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDTKAGGDQCGGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAVCGCGLVKAFQSAYYKRYGGGANELAGGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNDRKAWNDHWIFWVGPFIGAAVAAFYHQYILRAAALKAVGSFRSSSNI* | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g01623 | 289 | NCBIfam | MIP family channel protein | 45 | 268 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | CDD | MIP | 41 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | Gene3D | Glycerol uptake facilitator protein. | 26 | 289 | IPR023271 | - | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 175 | 193 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 251 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 126 | 145 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 211 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 41 | 60 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | PRINTS | Major intrinsic protein family signature | 89 | 113 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | Pfam | Major intrinsic protein | 33 | 268 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pte18g01623 | 289 | SUPERFAMILY | Aquaporin-like | 33 | 273 | IPR023271 | - | |
Pte18g01623 | 289 | ProSitePatterns | MIP family signature. | 107 | 115 | IPR022357 | - | |
Pte18g01623 | 289 | FunFam | Probable aquaporin PIP1-2 | 26 | 287 | - | - | |
Pte18g01623 | 289 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 10 | 278 | IPR034294 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g01623 | Pte-Chr18 | 27656203 | 27657568 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g01623 | 18 | 290 | Major Intrinsic Protein MIP | AT2G37170 | 84.249 | 3.35e-176 | 488 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g01623 | K09872 | - | cave:132192267 | 514.998 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte18g01623 | 18 | 27656203 | 27657568 | Pte15g01119 | 15 | 8381336 | 8383204 | RCT | |
Pte18g01623 | 18 | 27656203 | 27657568 | Pte18g01623 | 18 | 27656203 | 27657568 | RCT | |
Pte18g01623 | 18 | 27656203 | 27657568 | Pte9g00561 | 9 | 8220530 | 8223669 | RCT | |
Pte15g01119 | 15 | 8381336 | 8383204 | Pte18g01623 | 18 | 27656203 | 27657568 | RCT | |
Pte18g01623 | 18 | 27656203 | 27657568 | Pte17g00897 | 17 | 24077478 | 24078732 | RCT | |
Pte18g01623 | 18 | 27656203 | 27657568 | Pte15g00450 | 15 | 3181806 | 3182920 | RCT |