Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01611 ATGTACATCGGATCTGATAATTTGGTTCCTACGCTTAGGAAGAGGCCCAAAATGGCTGAAGATTATAAAGAAGTAACTTGTCGTGACACTTTAAAAGTAAATGCAAAAGATATGCTTCTGAATTTCCACTCTCCTTCCAAGAGACAAAGGGGACTGAAGCCTAACTTGCACGGGATCCGTATGCCGCAGGATGGACAAGGTGGAAGGAAATCGAAGTCTAAGGATAGCATGGGATTTCCTAATAAATGCTATTATGGTGAACGATACCCAAAACCTCTTCAGGGTGATAGGAGTACCAGTGGACTAAATTTATGTTTGAAATGCTTTCTTGGTGGAGAACTCTTACGCTGCAATGGAAAAGGCTGTAAAAGGCAGTATCACGCCTCTTGTTTGGATCCTCCTTTGAGTTTTGTTCCTCCAGGCATTTGGTATTGTTCATGGTGTATCAAGAAAAAGATAGAACTTGGTGTGTATTCCATCTCCAGAGGTGTTGAATGCATCTGGAGTGCTAGAGAGGTGTTTTCAGACAAATATGAACAACTTCAGAAACAATACTTGGTGAAGTATCAAGGTCTTGCTCATGCTTACAATCGCTGGATTCTAGAAACAGAGCTGCTTCTTGTGGCCCCAAAGCTTCTTGAAAAATTTAATAGAAAAATTCAGGTCATAAGCTGGAAAACAGAGTGGAGTGTGCCTCAACGCCTGCTACAAAATAGAATGATAGTGTTACCAAAGCAACATGGTAAACATTTTGACGGATGCATATATGAGTGGCTTGTAAAATGGACTGGCCTTGGTTATGATCATGCCACATGGGAGTTGGATGATGCTCCATTTATGAAATCACCTGAGGGTATAAAACTCAAAGAAGAGTATGAGATTCGTCATAGGAGGAAGCAAAGATGCTCAAGTCCCCAAGCTGATGCGGCAGACAAAGATTCCTTTGCTGAACTGACAGAATTGTCTACTGGAGACTCGTCTGGATTGCATAACCTCCATTTGGACTGTGTGAACAAGTTGCGGAAATGTTGGTATGAAGGTCAGAATGCTCTTCTCGTAGATGAACAGAGTGATCAGGATCGGGCCTTGAAGATTATCTTGTTTATCTTATCTTTGCATTGTCGTACTGAGAGATCATTTCTCATTATCTCAACACCAACTGCTCTATCTGCGTGGGAAGCAGAGTTCTTACATCTGGCTCCTACTGTAGACCTGGTGGTTTACAAGGGGAACAGAGATGTTCGAAGCAGCATCAGAAGTGTGGAGTTCTACAATGATAATGGAAGTATAATGTTTGAAGTGTTATTAACCTCTTCTGATGTTGTTGTTGAGGATTTTCATTTTCTGGAAAGTATCTCTTGGGAGGCAATTATAATTGATGAGTGCCAGCGTCCCAGAATGTCAAAACATTTTGACCACATCAAAATGCTAGCTACTGGTGTGAGGCTCCTTGTTGTTAGCGGGCAAATTAAGGAGTGCCAAGCGGACTACCTTGATTTGCTCTCCCTCCTTGGTTGTGGATGCTGTGGGTTTGACAGAAAGAAAGATGGGACTGACATTGGTTCTCACATTTCAAAATTGAAGGGAAGATTGGCTCAACACATTGCTTTTGAGTGCAAGTCGGCCTCTTTTAGATTCATAGAGTATTGGGTTCCCGCTCAGCTTTCTAATTTGCAACTTGAGCAGTATTGTGCTACTTTACTTTCAAATTCCATGCTTCTATGTTCTTGTTTGAAGAATGACTCAGTTGATGCCTTACGTGACCTTATTGTATCAATTAGAAAGTGCTGTGATCATCCCTATCTTGTGGATCAATCGCTGCAAGGTTTTGTAACAAAAGGTCTTCCTGTAGAAAACTATTTAGACGTCGGGATAGAGGCAAGTGGAAAGCTGCAACTTCTTGACAGGATCCTTCTAGAGATGAAAAAGTGTGGATTCAGAGTCATGATTGTTTTTCAGTCAATGGGAAGGTCTGGGGGTATTGGAGACATTTTGGAGGACTATATCCGTCAAAGGTTTGGTAAAGATTCTTATGTACGAATTGATGGAACAGAATATGTCCGCTCTAAAAAGCAAGCTGCACTCGACATGTTTAATGACAAAGGGAATGGGAAGTTTTTCTTCTTAATTGAAAATCGTGCCTGTCTCCCTAGCATAAAGATTACCTCAGTGGATGCTGTCATACTATTTGACAGTGATTTGGATCCACAAAATGACTTGCGAGCATTGCAAAGAATTTCTGTGAGTTCACAGTTTCCACAGTTAATATTATTCAGGCTGTATTCATCTTTTAGCCTCGAAGAAAAGATTTTAATTCTTGCAAAAGAGGGTGCGACTCTTGACTGCAATGTGCAATCCCTGAGCCACAGCACATGTCACGCCATGCTAGGCTGGCATGCATCTTATCTCTTCAATAAGCTAGATATATTCCATAGCGATGATTATTCAATTTCTGCTTCCAAAATGTCGTGGGAACAGTCATTATTGAACGATGTACTTTGTGAAATATCATCCTTATTGCCTTCTTTTAACTGCTACAAGGTCAATGACTATCATCGTGACTGCTCATTTGTATTGAAAGTAGAACAAAAGGGAGGAGTCTATGCCAACAGTTTCTCATTACTCGGAGAGAAGAACGAGCAAGTACTGGACAATGAAATCTCTGCCTTTTTCTGGGCAAAGTTGTTTGAAGATAGGTGTCCTGAGTGGAAACTTTTGCCAAGTTCATCTCAGAGAGCAAGAAAAAAAGTAAACTATTTTGACTTACAAAAAGAATTAGACATTGAAAAGCATCCTGTCCGACGAAATGGCAGGAAGGTCTGTGAGAATATTTTTGATCCTGTACATATTAAAGCAAAGTCGAAAACAAAAAAGAAACTCAAATCTGTTCATAATCCAAGCAGAGTTACCGATAAAACACATGCCTCCAGTACACTCCTTGAATCAAAATCGGTGGCTTCAGCTGATTACGAAAGTGCAGGCTTACCTTCTACTGATACAGCTGAGTCCGTGAAAGAGAGAGTATGGATTGATGCACACGAGGGCACTCATTTACCTCTGCCAGATGTGTCAGAGCTATGTGATTCTTTGCACCTTCCCGAAAGGATCAAGATTACTGCTACGAGGATCCACGATCACATCAGAAAATATTATGATGTTGGTTGTGACAGCATTCATACCGAGCAGGCATTTGTGATATCTATATGTTGGATGGCAGCTTCTTTGCTTAAGTACAAGATTAATAAGAAAGAATCAGTAGCAGCTGCCAGACAGCAGTTAAGATTTGACTGTGAGGCAGAAGAAGCAAAATCAATATACTTATTGTTAAAGAAGATCAAGAAAACTTTAAAAGAACTCCTTGAGCAATCATCTGATGGAGATGATTCTAAACTCTGCAAACAAGAGGAGCAAGATATGGTTGAAGGCGATATGCATGGGGGTGATAAGAGTCTACAGTGTTTGCTCCTGATGGAATCTACTTTGCTGGAACAGCCTTCCCAGAATATTCTTGAAGATATACCAATACAACTGCACGATCTAAGAGATCCTGACTGTCCCTTACTTGAAACGCCATCTGACATTATGCCTAGCGGACCAGTTGCTATAGAGCTTGATATAATTGAGAGGATAGATGGATATAGACATTCTCTGATGCCTAATTCTACATTGCTACTGCCGAATGAAGACAACTCAGCTACGCTGGTGTCACCAGGGACAGATCAGGAGCAGAGCAATGGTAGCCATGTCCACAGTCATGGAGGTGAACTGCTTCCAAGTGACACAGATGAAACACTTAACTGTTCCTTTATAAATCCACCAATAATGAGCGGAAATTTTACCCTCGTCCCATCCAGCAGTGATGTTACACTCCATGTTCATCTTAGTCCTGATCTCGCTTTTGTGGATGAAATGTCTTGGGTTGCATACTCTAGTCCTCTGCAAAATGAAATGGACAGAATACAAAAGAAAGAAGAGGAAGCCTTAAGAATACATGAAAAAAACGTAACACAACTTAAATTGGAACGTGCAAGAGAAATTGAAAATGTACACGAGAAGTATGATATGCTGTTTCAAGATGCCATGACCGCACTGATGCAAAAGAGAGAGGAACTCAAGTCATATCAGGAAAAAGTTTACATGAACAAGTTATTGGCTGAAGCTTTGATAGAGAAAGTTGATATTTATAAAGCACAAGGACCTCCTTGCACAAGGCAAGAAACAGATCCTGAAATAAGCGGTTTCCAACCATGCTTCTGTCCCACGGTCCAGTTATCTGGTGATCTTCCAAACAGCAATGAATCGCAAGCTTGCGCCCGCAATATGAGAGACCCCAAGACTGCTCCATCTTCTTTCGACATTCCTCTGACCAATTCCACACTTGCAGCGCTCCAAGTTGAGCAGTTGCCTGTTGGACCATTAGATGGAGATGCAATGACTACCTCGCAGTAA 4449 0.4116 MYIGSDNLVPTLRKRPKMAEDYKEVTCRDTLKVNAKDMLLNFHSPSKRQRGLKPNLHGIRMPQDGQGGRKSKSKDSMGFPNKCYYGERYPKPLQGDRSTSGLNLCLKCFLGGELLRCNGKGCKRQYHASCLDPPLSFVPPGIWYCSWCIKKKIELGVYSISRGVECIWSAREVFSDKYEQLQKQYLVKYQGLAHAYNRWILETELLLVAPKLLEKFNRKIQVISWKTEWSVPQRLLQNRMIVLPKQHGKHFDGCIYEWLVKWTGLGYDHATWELDDAPFMKSPEGIKLKEEYEIRHRRKQRCSSPQADAADKDSFAELTELSTGDSSGLHNLHLDCVNKLRKCWYEGQNALLVDEQSDQDRALKIILFILSLHCRTERSFLIISTPTALSAWEAEFLHLAPTVDLVVYKGNRDVRSSIRSVEFYNDNGSIMFEVLLTSSDVVVEDFHFLESISWEAIIIDECQRPRMSKHFDHIKMLATGVRLLVVSGQIKECQADYLDLLSLLGCGCCGFDRKKDGTDIGSHISKLKGRLAQHIAFECKSASFRFIEYWVPAQLSNLQLEQYCATLLSNSMLLCSCLKNDSVDALRDLIVSIRKCCDHPYLVDQSLQGFVTKGLPVENYLDVGIEASGKLQLLDRILLEMKKCGFRVMIVFQSMGRSGGIGDILEDYIRQRFGKDSYVRIDGTEYVRSKKQAALDMFNDKGNGKFFFLIENRACLPSIKITSVDAVILFDSDLDPQNDLRALQRISVSSQFPQLILFRLYSSFSLEEKILILAKEGATLDCNVQSLSHSTCHAMLGWHASYLFNKLDIFHSDDYSISASKMSWEQSLLNDVLCEISSLLPSFNCYKVNDYHRDCSFVLKVEQKGGVYANSFSLLGEKNEQVLDNEISAFFWAKLFEDRCPEWKLLPSSSQRARKKVNYFDLQKELDIEKHPVRRNGRKVCENIFDPVHIKAKSKTKKKLKSVHNPSRVTDKTHASSTLLESKSVASADYESAGLPSTDTAESVKERVWIDAHEGTHLPLPDVSELCDSLHLPERIKITATRIHDHIRKYYDVGCDSIHTEQAFVISICWMAASLLKYKINKKESVAAARQQLRFDCEAEEAKSIYLLLKKIKKTLKELLEQSSDGDDSKLCKQEEQDMVEGDMHGGDKSLQCLLLMESTLLEQPSQNILEDIPIQLHDLRDPDCPLLETPSDIMPSGPVAIELDIIERIDGYRHSLMPNSTLLLPNEDNSATLVSPGTDQEQSNGSHVHSHGGELLPSDTDETLNCSFINPPIMSGNFTLVPSSSDVTLHVHLSPDLAFVDEMSWVAYSSPLQNEMDRIQKKEEEALRIHEKNVTQLKLERAREIENVHEKYDMLFQDAMTALMQKREELKSYQEKVYMNKLLAEALIEKVDIYKAQGPPCTRQETDPEISGFQPCFCPTVQLSGDLPNSNESQACARNMRDPKTAPSSFDIPLTNSTLAALQVEQLPVGPLDGDAMTTSQ* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01611 1482 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 633 788 IPR001650 -
Pte18g01611 1482 Pfam Chromo (CHRromatin Organisation MOdifier) domain 176 219 IPR023780 -
Pte18g01611 1482 Gene3D - 163 221 - -
Pte18g01611 1482 Gene3D - 546 780 IPR027417 -
Pte18g01611 1482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 155 IPR013083 -
Pte18g01611 1482 Coils Coil 1357 1377 - -
Pte18g01611 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 509 IPR027417 -
Pte18g01611 1482 Coils Coil 1313 1348 - -
Pte18g01611 1482 SUPERFAMILY Chromo domain-like 225 280 IPR016197 -
Pte18g01611 1482 ProSiteProfiles Zinc finger PHD-type profile. 102 151 IPR019787 -
Pte18g01611 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 803 IPR027417 -
Pte18g01611 1482 SUPERFAMILY Chromo domain-like 121 223 IPR016197 -
Pte18g01611 1482 SUPERFAMILY FYVE/PHD zinc finger 103 152 IPR011011 -
Pte18g01611 1482 Gene3D - 231 288 - -
Pte18g01611 1482 MobiDBLite consensus disorder prediction 1232 1257 - -
Pte18g01611 1482 Gene3D - 327 545 IPR038718 -
Pte18g01611 1482 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 82 1129 - -
Pte18g01611 1482 ProSitePatterns Zinc finger PHD-type signature. 105 148 IPR019786 -
Pte18g01611 1482 Gene3D - 1309 1391 - -
Pte18g01611 1482 MobiDBLite consensus disorder prediction 46 76 - -
Pte18g01611 1482 SMART PHD_3 104 149 IPR001965 -
Pte18g01611 1482 MobiDBLite consensus disorder prediction 1232 1250 - -
Pte18g01611 1482 CDD SF2_C_SNF 628 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01611 Pte-Chr18 27584184 27602108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Pte18g01611 SNF2_N 5.5e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01611 K11643 - jre:109013771 1060.06