Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01609 ATGAGGATCAAGCTCAATGCAGACCATTCAATGGACAGGGAAGATAGTTCTCATACTTTTTCTAATACAAAATGCAAAGAGGTGAAGGCGGAACAACCATTTATTTCGGGCCTTCAAGATGATGGACTAGATGTTGAACATTTACTTGCTGAACCAAAAAATGATCATGTTTTATTGGATGGTGTCTTGTGCATCCATGAGGATAAGCTGGGAAGGCCTTGTGAGACTGAAAAATTTATACATGGGTTTGCGTTTGAACAAAAAGCTGATAGTGGTGGATTCAGTTCTCCAGTGACCAAGTACGAAGAAGCAAACTTACAACTTGATGTTCTTGATAGATTTCTAGATGGTGTAGATGAAGTTGGCGTTGGCGATTATCTTAATGGAATTGATGGTCTCCCCAGTCCATGTGAAGATTATCTTTTGGATTTTGATTTAGTGGGGAAAACTTCCATATTGGATGCTGTTCATTGCGGAGAATCGCTATCTCGAGAGTTGAGTATTGAAATTCATTCTCCAGGATCAAGTGGACGTAGTATGGCAGCTGGTGGGGTGTCAGAACCATCGACTGTGCTTCTTACAGAATCTGACTGCAAAAGTGATTCTCTTGACAAAACAGTAACTTGTGGGTTGCATGATGCCTTCAGGGTTGAATGGGGCTGTCAATCTGTATCTGAAGATGGCATCCAACAAAGCTCGATTGATATCCAGCAATTCGACAAATTGGACAATGGCAATTACCTTTTGCTTGGTGAAATGTCTAATGAAAAAAATGGAAAGAGCTTTTCCAGAGCAGGCCATATTGGTGCTAAAAGAGAGAAGAGACTGCGTAAGCCCACACAGAGGTACATTGAAGAATTCTCAGGTTTGAAAGCTGGAGAGAAGGTTTTGGCTGCTACAACAGAAAGTAAGCGACCCCTTGCAAGATCTTCTGAAGAACTTCATTACAAGGAGCAAGGAATTTCTAGGAAGTGTCCGGTGGAGACCTCCATCTGTGGACCTGATGACTTCTTGTTGTCTGAGTTGTGCACCCGGAGAGGATGTCCAAAGAGAAAAGTGACTATTTCATTTAAGGAACCTGAATCTGACACCGAATACTTCATTTCAGAGTCTGACAATGATTATATCAAAGAGAAGAGATCCAGAAAACATGATCGGAGAAAGCATCAAAGGATATGGACTCTGACTGAAGTAAATAAGTTGGTTGATGGGATTTCTGAGTATGGAGTTGGACAATGGACAAATATAAAGAGATTTCTGTTTAGTTCTTTTTCACATCGGACACCTATAGATCTCAGGGACAAATGGCGAAATCTTGTGCGAGGTGCCCAGAGATTTAAGAGAGAGGGTAAGCAAAATCAGCAAAATGGTTCACGCCTCCTGCCAGATTCTGTTCTACAGCGTGTTTGGGAGCTAGCTGAAATTCACCCTTACCCCAAGGTGCAAGACTCTGCGAAGCCCCTTGTTCATCAAATTGTACGTCCATCGTTTCCCACCCAGCATAAATCTGATCCAATCACCTACAGTAGAAGAAATTCAAGTAGAAAGAAATGGTGCGGAAATCCTAGTTTATAG 1575 0.4178 MRIKLNADHSMDREDSSHTFSNTKCKEVKAEQPFISGLQDDGLDVEHLLAEPKNDHVLLDGVLCIHEDKLGRPCETEKFIHGFAFEQKADSGGFSSPVTKYEEANLQLDVLDRFLDGVDEVGVGDYLNGIDGLPSPCEDYLLDFDLVGKTSILDAVHCGESLSRELSIEIHSPGSSGRSMAAGGVSEPSTVLLTESDCKSDSLDKTVTCGLHDAFRVEWGCQSVSEDGIQQSSIDIQQFDKLDNGNYLLLGEMSNEKNGKSFSRAGHIGAKREKRLRKPTQRYIEEFSGLKAGEKVLAATTESKRPLARSSEELHYKEQGISRKCPVETSICGPDDFLLSELCTRRGCPKRKVTISFKEPESDTEYFISESDNDYIKEKRSRKHDRRKHQRIWTLTEVNKLVDGISEYGVGQWTNIKRFLFSSFSHRTPIDLRDKWRNLVRGAQRFKREGKQNQQNGSRLLPDSVLQRVWELAEIHPYPKVQDSAKPLVHQIVRPSFPTQHKSDPITYSRRNSSRKKWCGNPSL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01609 524 MobiDBLite consensus disorder prediction 1 21 - -
Pte18g01609 524 Pfam Myb-like DNA-binding domain 393 439 IPR001005 -
Pte18g01609 524 Gene3D - 378 487 - -
Pte18g01609 524 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 501 - -
Pte18g01609 524 SUPERFAMILY Homeodomain-like 387 442 IPR009057 -
Pte18g01609 524 CDD SANT_TRF 391 441 - -
Pte18g01609 524 ProSiteProfiles Myb-like domain profile. 385 440 IPR001005 -
Pte18g01609 524 SMART sant 389 442 IPR001005 -
Pte18g01609 524 MobiDBLite consensus disorder prediction 496 524 - -
Pte18g01609 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 385 444 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01609 Pte-Chr18 27528846 27533535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01609 393 439 Single Myb Histone (SMH) Gene Family AT1G72740 46.939 9.20e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01609 - - qsa:O6P43_010278 419.083