Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01590 ATGCCGATCCGTAACATCGCTGTAGGTAGTTATGAGGAGGCATATCACCCAGATGCCTTGAAACAAGGTCTAGCTGAGTTCATCTCAACCCTAATTTTTGTCTTTGCCGGCTCTGGTTCCGGCATAGCCTACAACAAGCTCACCCATGATGGAGCTGCCAGCCCCGCCGGCCTTATCTCGGCTGCCGTCGCTCATGCCTTTGCACTTTTCGTGGCCGTATCGGTCGGCGCTAACATCTCAGGTGGTCACGTTAACCCAGCTGTCACCTTCGGTGCCTTCATCGGTGGCAACATCACCTTCTTCCGCGGTCTTCTCTACATCATCGCTCAGCTTCTCGGTTCCATTGTCGCATCCTTGCTACTGAAGTTCGTCACTGGTGGCCTGGCAGTACCCGCATTTGCACTCTCAGCTGGGGTAGGTGCATGGGAGGGACTGGTTTTCGAGATAGTGATGACATTTGGACTGGTGTACACCGTGTATGCTACAGCCATTGACCCAAAGAGGGGTAATTTGGGAATAATCGCACCCATCGCTATTGGTTTCATAGTCGGAGCCAATATTTTGGCGGGCGGGGCATTTTCTGGAGCATCCATGAACCCGGCTGTATCATTCGGACCTGCCATGGTGAGCTGGAGCTGGGACAACCATTGGGTGTACTGGCTTGGACCTCTGATTGGCGGTGGACTTGCTGGTGTTGTGTATGAGTTGTTCTTCATCAGCCACTCCCATGAGCAGTTGCCAACTACGGAATACTAA 756 0.5291 MPIRNIAVGSYEEAYHPDALKQGLAEFISTLIFVFAGSGSGIAYNKLTHDGAASPAGLISAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITFFRGLLYIIAQLLGSIVASLLLKFVTGGLAVPAFALSAGVGAWEGLVFEIVMTFGLVYTVYATAIDPKRGNLGIIAPIAIGFIVGANILAGGAFSGASMNPAVSFGPAMVSWSWDNHWVYWLGPLIGGGLAGVVYELFFISHSHEQLPTTEY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01590 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte18g01590 251 SUPERFAMILY Aquaporin-like 13 246 IPR023271 -
Pte18g01590 251 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte18g01590 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Pte18g01590 251 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Pte18g01590 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01590 Pte-Chr18 27375548 27377207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01590 1 252 Major Intrinsic Protein MIP AT2G36830 80.159 2.60e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01590 K09873 - mnt:21405390 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01590 18 27375548 27377207 Pte18g01590 18 27375548 27377207 RCT