Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01585 ATGACTCCGTTGCTGCTCTTTCTAATTGGGTTGTTCACTATCCTTGACGTCCAAGCAAAGGGCAATCCATTGTTTAGTGACGCTCTTGATCGTCATGCAGCAGGAGCAAAAGGCAGACATATTATGCGTCATAATTTAACCAGGGGCCATCGGCCAAGGTTCAAAGCCGGTTCATGGAAGAAAGCCGCTTCAACATTCTATGAAGGCAGCTCGGGAACATTTGGAGGAGCTTGTGGCTACAAGGACGTAGTGAACGAAGGGTATGGCTTGGACACATCAGCTTTGAGCACAGTTCTGTTCAACGATGGCCAGTCGTGCGGATCATGTTACGAGATCAAATGTGTGGACTCTAAATGGTGCAAGAAAGGGAAACGATCACTTTTTGTTACTGCAACAAACTTTTGCCCACCTAACTACAGTCTTAGCAACGACGATGGAGGATGGTGTAACCCACCTCGTGAGCATTTTGATCTAGCTAAGCCTTCATTTCTCAAATTCGCAGAGTACAAGGGTGGCATTGTTCCTGTTCACTACCGAAGGGTGCCATGCAAGAAAAAGGGAGGAATCAAATTCACAATTGGCGGGAATCCATACTTCTATCAAGTGCTAGTGTGGAACGTCGGGGGTTCTGGTGAAGTGACAAGCGTTCGAGTGAAAGGAGATGACAAACTTAAATGGACATCTATGACGAGACTTTGGGGGCAGATATGGGCTTCCACTGCCAACTTGACGGGAGAGTCACTCACCTTCCGAGTTGGATCAAGTGATCGTAGATTCTCAACCTCGCGGCGTGTTTGCCCCAAGGATTGGCAATTCGGTCAAACCTTCGAAGGCAAAAACTTTCCCTAG 849 0.4747 MTPLLLFLIGLFTILDVQAKGNPLFSDALDRHAAGAKGRHIMRHNLTRGHRPRFKAGSWKKAASTFYEGSSGTFGGACGYKDVVNEGYGLDTSALSTVLFNDGQSCGSCYEIKCVDSKWCKKGKRSLFVTATNFCPPNYSLSNDDGGWCNPPREHFDLAKPSFLKFAEYKGGIVPVHYRRVPCKKKGGIKFTIGGNPYFYQVLVWNVGGSGEVTSVRVKGDDKLKWTSMTRLWGQIWASTANLTGESLTFRVGSSDRRFSTSRRVCPKDWQFGQTFEGKNFP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01585 282 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 198 278 IPR007117 -
Pte18g01585 282 PANTHER EXPANSIN-A15 54 281 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 113 124 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 199 220 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 264 280 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 235 256 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 187 199 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 163 176 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 127 137 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 87 101 IPR002963 GO:0009664
Pte18g01585 282 PRINTS Expansin signature 146 163 IPR002963 GO:0009664
Pte18g01585 282 SUPERFAMILY Barwin-like endoglucanases 58 206 IPR036908 -
Pte18g01585 282 SUPERFAMILY PHL pollen allergen 185 278 IPR036749 -
Pte18g01585 282 CDD DPBB_EXPA_N 59 183 - -
Pte18g01585 282 PRINTS Expansin/Lol pI family signature 264 278 IPR007118 GO:0005576
Pte18g01585 282 PRINTS Expansin/Lol pI family signature 96 114 IPR007118 GO:0005576
Pte18g01585 282 PRINTS Expansin/Lol pI family signature 58 73 IPR007118 GO:0005576
Pte18g01585 282 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Pte18g01585 282 PRINTS Expansin/Lol pI family signature 171 187 IPR007118 GO:0005576
Pte18g01585 282 Gene3D - 185 281 IPR036749 -
Pte18g01585 282 Gene3D - 47 184 IPR036908 -
Pte18g01585 282 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 75 188 IPR007112 -
Pte18g01585 282 SMART dpbb_1 92 178 IPR007112 -
Pte18g01585 282 Pfam Expansin C-terminal domain 189 267 IPR007117 -
Pte18g01585 282 Pfam Lytic transglycolase 92 178 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01585 Pte-Chr18 27344791 27345879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01585 52 281 Expansin Gene Family AT3G55500 62.393 2.45e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01585 - - zju:107431981 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01585 18 27344791 27345879 Pte18g01585 18 27344791 27345879 RCT