Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01575 ATGTGCTACAAAAAAAAAGCGTTATTTTATGGGGGTGAGAAGGTTGGGCTCGGGTCTAAGGAAGGGAAGAAGGAAGGAGCAGATGGGGGTAAGAAGGATTATGAGGTGAACGAGAAGGCAGGAATTCGGGAAACAATGCTGGTACCCCCATGGCTGGAGACGTTGCTGAAAACTTCATTTTTCAGCGTTTGCCGCACTCACAGAGATGCAGCTAGGAGTGAGTGTAACATGTTCTGTTTGGATTGCAATGAGGATGCCTTTTGCTTTTATTGCCGTTCATCAAGGCACAAGGATCATCAAGTCATTCAGATAAGAAGGTCTTCATATCATGATGTAGTGAGAGTTTCTGAGATTCAGAAAGTACTGGACATAAGTGGAGTGCAGACTTATGTGATTAACAGTGCCAGAGTGATTTTCCTGAATGAAAGGCCTCAGCCCAAATCTGGGAAAGGAGTAGCTCACATTTGTGAAATATGTCGAAGAAGCCTCTTGGACACTTTTCGTTTCTGCTCTTTTGGATCTTGTAGGGATAAAGAGAAATGGGGATGCAAGTTTTACTTTAGATGCTAG 570 0.4351 MCYKKKALFYGGEKVGLGSKEGKKEGADGGKKDYEVNEKAGIRETMLVPPWLETLLKTSFFSVCRTHRDAARSECNMFCLDCNEDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVIFLNERPQPKSGKGVAHICEICRRSLLDTFRFCSFGSCRDKEKWGCKFYFRC* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01575 189 SUPERFAMILY B-box zinc-binding domain 62 107 - -
Pte18g01575 189 Gene3D Classic Zinc Finger 57 123 - -
Pte18g01575 189 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 43 175 - -
Pte18g01575 189 Pfam PLATZ transcription factor 105 173 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01575 Pte-Chr18 27250134 27254576 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte18g01575 PLATZ 8.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01575 - - qsu:111984939 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01575 18 27250134 27254576 Pte18g01575 18 27250134 27254576 RCT