Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01572 ATGAAAGTCAATACAACTTCCATGCCTCACTTCCTTTCTTGCTTCACTTTCCTTCTATTACTTTTCGTAAGTCACTATTGTTCTTCACAGAAAATTTGTCCAAACTGTGGATCCATTGAAGTTCCATATCCTCTTAGCACAAATCCCGTTTGTGGTGATCCTGGTTACACTCTTCGTTGTGATCCTCACTCTCAAAAACTATACTTCGACTCCCTAAATAGAAGTTCATATCTTATACTCAAAATTATGGCTTCCATCCAACGAATGGTGGTGCAACCATCACCATGGGTGCCTGGCAAATGTGTTACACAAGACATGGAGACGAGTGAAGGCCTTTGGTTGAATCAGTCACTCCCTTTCAATATCACTTCATCAAACACAATCTTCTTATTAAACTGTTCTCCTCGCCTCTTATATTCTCCTCTCAATTGCACGTCTTCTAGTCTCTGTCACCAGTACTTGGAAAGCTCTGAACATGTTGACAGGAAACAAGCACTACAGTGTGCAAGTGATCTTGACCCTTGTTGCAGCTTTGTTGCTGGAGGGATGCCTTCAGCATACAAGATAAGGCTTCATAGTTCTGGTTGCAGAGCTTTCAGAAGCATCCTTCATTTGGATGTGGAAAAGCCAGCTGACCAGTGGGAAGAAGGTATTGAAATTCAATGGTCTGCTCCACCTGAACCTATATGTAAACTACAGTCAGATTGCACTGGAGCTTCTCAATGTTCAGCTTCTGCTGAAAATGGCCTCTCACGCTGTTTCTGCAGGAGAGGATACTACTGGGATCCTATTCTTGTAACTTGCTTGAAGAACAAGAAAAAGTATAAGGACAAGTTCAGCTGGGAGATCCCAATAGCGGTAATCTCATTTCTCTCTCTAACTCTACTGTTGGTCATCATAAAAAGGAAGTCTTGCATAGTTAGTAATCGCGCTAAGCTTGCCAAGGCAAGAATGGAGGTGTTAAAATCAAGCAAGGATGGAAAACCAGCCAGGATGTTTCGACTGAAAGAAGTGAGTGAAGCAACAAACAATTTCTCTAAAGACAGGGTTTTAGGAAGTGGTGGCTTTGGAGAAGTATACAAAGGTAAACTTCGGGATGGAACAATCGTGGCTGTCAAGAAAGCTAAAGTGGGAAACATCAAAAGTACCCAACAAGTGCTTAATGAAGTGGAAATACTTTCTCAGGTCAATCACAAGAATCTAGTTAGAGTCTTAGGTTGTTGTGTAGAATCTGATCAGCCTCTGATGATCTATGAGTACATCCCCAATGGGACCCTTCACGATCATATACATGGCAAGTATTCCATCTTTCTGGACTGGAAGAAAAGGCTGAGAATTGCTTTACAAACTGGTGAGGCGTTAGCTTATTTACATTCTGCTGCAAACACACCCATCTATCATAGAGATGTAAAGTCAACGAACATACTGTTGGATGAACATTTCAATGCAAAAGTATCAGATTTTGGTCTGTCAAGATTGGCCAATCCAGGACTGAGTCACGTTTCAACTTGTGCTCAGGGAACACTGGGATACTTGGATCCTGAGTACTACCGCAATTACCAATTAACAGATAAAAGTGACGTTTATAGCTATGGGGTTGTGTTGCTTGAGCTTTTGACTTCCCAAAAGGCAATAGACTTCTCTCGCGATGAAGATGATGTCAACCTAGCAATTTACGTTAGCCGGCATGTGAGCAAAGGTGAAGTGGATTATATCATGGACAGTAAGCTCCTTTCAACAGACCCTTCTGGTGACATGTCATTGAAAAGCCTGCATCTATTATTAGAGGTTGCACTTGCATGCTTGAAGGAGAAGAAGAGTGATAGGCCTAACATGAAGGACGTGGTCCAACAACTTCAGAGCATAATTCACCATGTAGACCAACAGAACGATGTGAATGAGGCATGCAATTAA 1914 0.4185 MKVNTTSMPHFLSCFTFLLLLFVSHYCSSQKICPNCGSIEVPYPLSTNPVCGDPGYTLRCDPHSQKLYFDSLNRSSYLILKIMASIQRMVVQPSPWVPGKCVTQDMETSEGLWLNQSLPFNITSSNTIFLLNCSPRLLYSPLNCTSSSLCHQYLESSEHVDRKQALQCASDLDPCCSFVAGGMPSAYKIRLHSSGCRAFRSILHLDVEKPADQWEEGIEIQWSAPPEPICKLQSDCTGASQCSASAENGLSRCFCRRGYYWDPILVTCLKNKKKYKDKFSWEIPIAVISFLSLTLLLVIIKRKSCIVSNRAKLAKARMEVLKSSKDGKPARMFRLKEVSEATNNFSKDRVLGSGGFGEVYKGKLRDGTIVAVKKAKVGNIKSTQQVLNEVEILSQVNHKNLVRVLGCCVESDQPLMIYEYIPNGTLHDHIHGKYSIFLDWKKRLRIALQTGEALAYLHSAANTPIYHRDVKSTNILLDEHFNAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDEDDVNLAIYVSRHVSKGEVDYIMDSKLLSTDPSGDMSLKSLHLLLEVALACLKEKKSDRPNMKDVVQQLQSIIHHVDQQNDVNEACN* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01572 637 FunFam Wall-associated receptor kinase-like 20 421 632 - -
Pte18g01572 637 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 317 420 - -
Pte18g01572 637 SUPERFAMILY Protein kinase-like (PK-like) 327 620 IPR011009 -
Pte18g01572 637 CDD STKc_IRAK 351 622 - -
Pte18g01572 637 Gene3D Phosphorylase Kinase; domain 1 317 420 - -
Pte18g01572 637 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 626 IPR044652 GO:0004672
Pte18g01572 637 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01572 637 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01572 637 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
Pte18g01572 637 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Pte18g01572 637 Pfam Protein kinase domain 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01572 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01572 Pte-Chr18 27231542 27233455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01572 33 629 Receptor kinase-like Gene Family AT5G02070 46.593 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pte18g01572 Pkinase 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01572 - - qsa:O6P43_009488 960.288