Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01564 ATGGAGTTTGAAGTCATGGGTTTGATCCTAGCTTTCATTCTATGGGCTGCATGGCTCATGTTGGCAGCAGAACATCGAAGACGAAGACGTGAGCAACCGAGCCAGTCACTTCCACCAGGACCCAAGCCCTGGCCAATTGTAGGCAACATTTTCCAGTTAGGTTGGTCACCCCACGAGTCATTTGCAAAATTGGCACGTAAACATGGTCCAATCATGACTCTCCGGCTTGGCTCTATGAGCACGGTGGTGATCTCTTCCAGCGAAGTGGCTCACACAATGTTCAAGAAACACGACCTGATTCTTGCTGGAAGAAAAATCTACGAGTCCATGAAAGGGAAACATGGTAAGTACGAGGAGGGCTCGCTGATTACGGCTCAATATGGTCCGCAATGGCGTCTCTTGAAGCGCCTCTGCACCACCGAGTTCTTTGTCACTAGCCGCCTGGAGTCAACGCTCAGTGTGCGTCAAAAATGCATAGATCAAATTGTACAGTTCATTGAAGAAGCTGGCGATGGAGGTGCCAGTGCTGTTGATGTGGGAAGGTACTTTTTCTTGATGTCCTTTAATCTTATTGGGAACCTGATATTCTCAAAGGACTTATTGGACCCACAATCAAAAAGAGGAGCTGAGTTTTTCTACCATACCGGAAAAGTGATGGAGTTTGCAGGGAAGCCTAACGTGGCAGACTTCTTTCCAATTCTAAGGTGCCTTGATCCCCAAAGCATAAGGAGGAAGACTCAATTTCATATTGAACGTGCCTTTGAGATTGCTAAAGGTTTCATCGATGAGCGAATGAAACTCATGTTTGCCAAAAACTTTGGAAATGAGGACAAGAACAAAGACTATTTGGATGTGTTATTGCAGTTTCGAGGTGATGGTATTGTGGAGCTCTCCAAATTTTCCTCAAGAACCATTAACGTTATTGTCTTTGAAATGTTCACTGCGGGGACCGACACAACAACTAGCACACTGGAATGGGCAATGGCGGAGCTCTTGCACAATCCAACAACGATGGAGAAAGTAAAGGTAGAGTTGAGAGACACCATAGGTCTAGATGAGAAACTGGAAGAGAAGCACATAGAGAATCTTCCCTATCTCAAAGCAGTTATGAAGGAAACTCTGAGACTCCATCCACCTCTACCCTTTTTAGTCCCACACATGGCCATGGATTCTCTGAACATACTGGGATATCATATTCCTAAAGACACACAAGTGCTTGTGAATGTTTGGGCAATTGGGCGTGACCCCAAGACCTGGGATGACCCTCTATCGTTCAAGCCTGAAAGATTCTTGGAACCAGAGATGGCAGATTACAAGGGCCATCACTTTGAATTTTTACCATTCGGCTCAGGACGCCGAATGTGCCCAGCTGTCCCACTTGTTTCTCGCTTGCTTCCGCTAGCTCTGGGTTCACTGCTGCACTCTTTTGATTGGATTCTCGCCGATGGGCTTAAGCCAGAGCAAATGAACATGACTGAAAAAATGGGTATCACACTCAGAAAGGCTGTTCCTCTCAAAGCCATACCTACACCAAAACGACGTCACGTGGGTGTATCTTGA 1560 0.4622 MEFEVMGLILAFILWAAWLMLAAEHRRRRREQPSQSLPPGPKPWPIVGNIFQLGWSPHESFAKLARKHGPIMTLRLGSMSTVVISSSEVAHTMFKKHDLILAGRKIYESMKGKHGKYEEGSLITAQYGPQWRLLKRLCTTEFFVTSRLESTLSVRQKCIDQIVQFIEEAGDGGASAVDVGRYFFLMSFNLIGNLIFSKDLLDPQSKRGAEFFYHTGKVMEFAGKPNVADFFPILRCLDPQSIRRKTQFHIERAFEIAKGFIDERMKLMFAKNFGNEDKNKDYLDVLLQFRGDGIVELSKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHNPTTMEKVKVELRDTIGLDEKLEEKHIENLPYLKAVMKETLRLHPPLPFLVPHMAMDSLNILGYHIPKDTQVLVNVWAIGRDPKTWDDPLSFKPERFLEPEMADYKGHHFEFLPFGSGRRMCPAVPLVSRLLPLALGSLLHSFDWILADGLKPEQMNMTEKMGITLRKAVPLKAIPTPKRRHVGVS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01564 519 CDD CYP76-like 65 509 - -
Pte18g01564 519 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 FunFam Cytochrome P450 76C4 29 508 - -
Pte18g01564 519 Gene3D Cytochrome P450 22 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 SUPERFAMILY Cytochrome P450 38 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Pte18g01564 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01564 519 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 511 - -
Pte18g01564 519 Pfam Cytochrome P450 38 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01564 Pte-Chr18 27191278 27193337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01564 4 513 Cytochrome P450 AT3G52970 63.722 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01564 - - jre:109005164 759.985