Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01558 ATGGAAATGCCCGGTAGAAGATCTAACTACACGCTCCTTAGTCAAGTACCTGACGACCAGTTTGGCGGCGGAACATCAACTTCTGTTTCAACTTCCCTGTTCGAGTCTTCCTCATCCGCAGAAGGAAGGAGCAATAAAGCTAAAGCTGATAGAGGCGGCGGCTTTGATTGGGACGTAGGTTCTGATCATCGATTAAATCAACCGGGTTATCGGATCGGAAACTTGAATCCCTCGATCGGGTTGCAAAGGCAATCTAGTGGGAGTAGTTTTGGTGAGAGTTCTTTGTCTGGAGAGTATTACGCACCGACTTTGTCAACTGCTGGAGGAAATGAAATCGACAGTTTTGGTTACTTCAATGAGGATGGTTTCCGGGTAGGCGGTGGCGGTGACTTACGAGGTAGGGTAGCGGATAGAACGGTGGGCACTGGCGTGGGAGGGTCATCATCCAGTAAAAGTTGGGCACAACAGACAGAGGAGAGCTATCAATTGCAGTTAGCTTTGGCACTTCGTCTTTCATCTGAAGCCACAAGAGGCGATGATCCGAATTTCCTGGATCCAGAACCGGTTGAATCGGCCTTGAGATCGTCTTCATGGTTTTCAGCTGAGGCGGTGTCACATCGATTTTGGGTGAATGGATGCCTCTCGTATTCTGACAAAATTCCTGATGGTTTCTACCTAATCAATGGGATGGATCCCTATATATGGACAATGTGCGCTGATATTCAAGAAAGTGGTCGAATTCCATCCATCGAATCCTTAAAATCTGTTGACACTGGAACTGATTCTTCAATTGAAGTGGTTTTGATTGACCGTCGTAACGATCCAAGCTTGAAGGAACTACAGAACAGGGTATTCACTATTTCTGCTTCCTGTGCAAGACCGACAGAGGTTGTGGACCAGCTTGCAAAGCTTGTTTGCAATCGTATGGGGGGTTCAACATCTTCAGGAGAAGATCAGTTCATTTCCATCTGGAGAGAGTGTATTGATGACCTTAAAGAATGCTTAGGTTCTGTTGTTTTCCCAATAGGTGGTTTGTCTATTGGTCTTTGCAGACAGAGAGCCATATTATTCAAGGTTCTTGCAGACATTATCGAGTTGCCATGTCGAATTGCCAAGGGATGCAAGTATTGTTGTAGGGAGGATGCTTCTTCTTGTCTTGTCAGGTTAGGAGTTGAGAGGGAATATCTTGTTGATTTAGTTGGGAAACCAGGTCAATTATATGAACCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCAGTTTGTTCACCGTTGCGCTTTCCACGAATTAAACGCGCTGAATCCAACGTTGATTTCAGGTTACTGGCTAAGCAGTACTTTGCCGACTGTCAGTCACTTGATATTGTCTTTGAAAGCACTTCTGGAGGATCTGATATTGATGGAGATTCTAATATCCCTGCTTATCACAAGCATTTTGATAGAACAGGGAGAGACATGGATAATCATATTTTAGTGCCAATGTCTACGAACGAAACTTCTCAACAAACTCTGCTGCGACAAGTCTCTCAGGCGACCACGAATGACGAACAATCTGAAGCATTAAATTCTTGCGTCACTTCAGATTCAACTGCTGATTCTTTCCCAAAACATATCAACCTTGAAAGACAAAGGCAGGCACAACAGCTTACAGCACTCGGCAATTCAAGGGTAGATACTACTCGGGAGCAGAGGTTTTCTGAAGGAATCCAAATGGTTTCTTACAAGTTTTGTAAGGAACTTGGCCTTGATATGGAGGATCTGGACATTCCTTGGAGTGATCTTGTGTTAAAAGAGCGAATTGGAGCAGGTTCTTTTGGCACGGTACATCGGGCTGAGTGGAATGGCTCAGATGTTGCTGTAAAGATTCTAGTTGAACAAGACTTTAACACTGAGCTCTTCAAAGAATTCCTCAGAGAGGTTGCAATCTTGAAACGGTTACGTCATCCCAACATTGTCTTATTCATGGGTGCAGTCACACAACCTCCTAATTTATCTATAGTCACCGAATTTTTGGCAAGGGGTAGTTTATATAAACTTTTGCATAGACCTGGTGCTCGGGAAGCTTTGGATGAAAGGAGAAGATTAAGCATGGCTTATGATGTTGCAAAGGGAATGAATTATCTTCATAAGAGAAATCCTCCCGTAGTTCACAGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAAAAATATACAGTGAAGGTTTGTGATTTTGGACTATCTCGTTTGAAGGCTAATACATTTCTTTCTTCTAAGTCAGCTGCTGGGACACCTGAGTGGATGGCACCAGAAGTTCTTCGTGATGAACCATCAAATGAGAAGTCTGATGTCTACAGCTTTGGTGTGATTTTGTGGGAGCTTGCGACATTGCAACAGCCATGGGGTAATTTAAATCCTGCTCAGGTGAGGCATACATCTAATCTTAAATTTTTTTGTACCCATTGCTTATGA 2451 0.4349 MEMPGRRSNYTLLSQVPDDQFGGGTSTSVSTSLFESSSSAEGRSNKAKADRGGGFDWDVGSDHRLNQPGYRIGNLNPSIGLQRQSSGSSFGESSLSGEYYAPTLSTAGGNEIDSFGYFNEDGFRVGGGGDLRGRVADRTVGTGVGGSSSSKSWAQQTEESYQLQLALALRLSSEATRGDDPNFLDPEPVESALRSSSWFSAEAVSHRFWVNGCLSYSDKIPDGFYLINGMDPYIWTMCADIQESGRIPSIESLKSVDTGTDSSIEVVLIDRRNDPSLKELQNRVFTISASCARPTEVVDQLAKLVCNRMGGSTSSGEDQFISIWRECIDDLKECLGSVVFPIGGLSIGLCRQRAILFKVLADIIELPCRIAKGCKYCCREDASSCLVRLGVEREYLVDLVGKPGQLYEPDSLLNGPSSISVCSPLRFPRIKRAESNVDFRLLAKQYFADCQSLDIVFESTSGGSDIDGDSNIPAYHKHFDRTGRDMDNHILVPMSTNETSQQTLLRQVSQATTNDEQSEALNSCVTSDSTADSFPKHINLERQRQAQQLTALGNSRVDTTREQRFSEGIQMVSYKFCKELGLDMEDLDIPWSDLVLKERIGAGSFGTVHRAEWNGSDVAVKILVEQDFNTELFKEFLREVAILKRLRHPNIVLFMGAVTQPPNLSIVTEFLARGSLYKLLHRPGAREALDERRRLSMAYDVAKGMNYLHKRNPPVVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVRHTSNLKFFCTHCL* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01558 816 Gene3D Phosphorylase Kinase; domain 1 587 672 - -
Pte18g01558 816 ProSitePatterns Protein kinases ATP-binding region signature. 600 621 IPR017441 GO:0005524
Pte18g01558 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Pte18g01558 816 MobiDBLite consensus disorder prediction 13 43 - -
Pte18g01558 816 ProSiteProfiles Protein kinase domain profile. 594 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01558 816 CDD STKc_MAP3K-like 600 802 - -
Pte18g01558 816 Pfam Ethylene-responsive protein kinase Le-CTR1 201 406 - -
Pte18g01558 816 Gene3D Transferase(Phosphotransferase) domain 1 673 811 - -
Pte18g01558 816 FunFam Serine/threonine-protein kinase isoform 1 584 672 - -
Pte18g01558 816 SMART serkin_6 594 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01558 816 MobiDBLite consensus disorder prediction 13 55 - -
Pte18g01558 816 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 184 801 - -
Pte18g01558 816 Pfam Protein tyrosine and serine/threonine kinase 595 804 IPR001245 GO:0004672|GO:0006468
Pte18g01558 816 SUPERFAMILY Protein kinase-like (PK-like) 582 804 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01558 Pte-Chr18 27145997 27153201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01558 1 802 MAP Kinase Kinase Kinase AT5G03730 64.670 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte18g01558 PK_Tyr_Ser-Thr 9.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01558 K14510 - qsa:O6P43_009518 1097.03