Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01553 ATGATGGCTCATAAGAACTTGCATGAGCTATTGAGTGAGGATCAAGAACCATTCCATCTTAAGGACTATATTGAAGATAGGCGTAGCCAGCTCAAAAGGCCACAACCCAAAACGCAGTTACAATTCAAGAAAAGAAAGCCAATCCATGAAGGCTCAAACTTTCCAGGCAGTTTATGCCACCAGGCTTGTCTTTTCTCGTTAAATGACAAACCAGACCTGAGGAAATCTCCCCTCTTCGAATTCACGTCCCCTGTTAAAAGCCCCTGCAAACATGCCAATGCTATTTTCCTTCACGTCCCTGCCAGAACAGCAGCTCCTTTGGTTGAGGCTGCTCTTAGGATTCAGAAACAGTCCTGCCCTAGAAAAGTAAAATCCCAAAACAAAAACCATGGCTTTGGGTTGTTTGGATCACTGTTAAAGAGGCTCACACCAAAAACTCGGACCCAGAAGAAGCGTGATATGAAAGGGGTTGAAGTCGAGGTCTCTGTAGAAGATATTCTGAGATGGGATTCATCTGTCAGAGGTGGAAAATTATGCAATGGAAGAAATATCGTTGAAGAGAAAGTAATTTTCGCCCTGGAGGATAAAGATGCATCTGAGTTAAGTCGATCCTGTTCTTGTAGCGGAAGAAGGCCCGGCAGTGCTGTTTGGTCTGAGAGTAATGAAGAGAAGTCGTTAAACATAGAAACGTCAACTAGCAGTCGTGGATACGACGCGTCTGAAGAGATGGACTTCGTGTCGAAACAGAGACAAGACACAGAGTGTGCTTCCTTTGACATGAGCCTCTGCGACAGCCCTTTTCATTTTGTTCTACAATGCAGCCCGTCCCCTGGCAGCCGGAAACCTGAATTACGAACATCGGCGGTCTCACCCATTCGACATAAGACGGAGGACAAAGATGATAATGGAGTTGAGGGTTGCAAAAACTTCCAAACTGTGGTGGAAGAGGAAGAAAAGGAACAGTTCAGTCCAGTGTCTGTATTTGACCCACCATTTGACGACGACGACGACGGTCGTGAAAACGACGAAGACGATCAAGAAATCGACATGGATTGCAGCTATGCCATCGTGCAGAGAGCAAAGAAGCAGCTGCTACATAAGCTTCGCAGATTTGAGAAACTTGCACAACTAGATCCAGTTGAACTTGAGAGAAGGATATTGGATGATCAAGAACAAGATGATGATGAAACAATCTTTGAAGATGGGGAAGAGGGTTCTGTAGAGGATGATACGGAAACTCCAGAGGAAGAATTGGGTTTCAAAGGTTTCTGCACAGGACTGCTTTGCAGTCCTACTTTCCAAAGCATGCAGGGGATGCCTGCACACATAAAGAGATTGGCATCAGACCTAATCCGCGAGGAAGAGAAAGAACTTGAAGTTTTATCTGACAAGGAGACTCTCATTAAAAGGGTTTGCAAAAAGCTTGAGTTGTGGAAAGAGAAAGAATCTGACACCATAAATAGGATGGTTGAACAGGACTTTTGTATAAATGCTGATAGCTGGAGGAAAAATGTAGAGCATAAGAGTGAGGTTGCAAGAGGTCTCGAGCTTTCTATTTTTAGCTTTTTAGTCGACGAGTTGTCAGAGGAACTGGTACGGTAG 1602 0.4451 MMAHKNLHELLSEDQEPFHLKDYIEDRRSQLKRPQPKTQLQFKKRKPIHEGSNFPGSLCHQACLFSLNDKPDLRKSPLFEFTSPVKSPCKHANAIFLHVPARTAAPLVEAALRIQKQSCPRKVKSQNKNHGFGLFGSLLKRLTPKTRTQKKRDMKGVEVEVSVEDILRWDSSVRGGKLCNGRNIVEEKVIFALEDKDASELSRSCSCSGRRPGSAVWSESNEEKSLNIETSTSSRGYDASEEMDFVSKQRQDTECASFDMSLCDSPFHFVLQCSPSPGSRKPELRTSAVSPIRHKTEDKDDNGVEGCKNFQTVVEEEEKEQFSPVSVFDPPFDDDDDGRENDEDDQEIDMDCSYAIVQRAKKQLLHKLRRFEKLAQLDPVELERRILDDQEQDDDETIFEDGEEGSVEDDTETPEEELGFKGFCTGLLCSPTFQSMQGMPAHIKRLASDLIREEEKELEVLSDKETLIKRVCKKLELWKEKESDTINRMVEQDFCINADSWRKNVEHKSEVARGLELSIFSFLVDELSEELVR* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01553 533 Coils Coil 533 533 - -
Pte18g01553 533 MobiDBLite consensus disorder prediction 315 346 - -
Pte18g01553 533 MobiDBLite consensus disorder prediction 388 415 - -
Pte18g01553 533 PANTHER OS04G0572500 PROTEIN 2 531 - -
Pte18g01553 533 Coils Coil 444 464 - -
Pte18g01553 533 MobiDBLite consensus disorder prediction 216 239 - -
Pte18g01553 533 MobiDBLite consensus disorder prediction 216 238 - -
Pte18g01553 533 MobiDBLite consensus disorder prediction 330 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01553 Pte-Chr18 27110647 27114327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01553 1 332 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.566 5.11e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01553 - - qsa:O6P43_009530 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01553 18 27110647 27114327 Pte18g01553 18 27110647 27114327 RCT