LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte18g01535	ATGGTGGTACCAGAACCTGAGATGGTGTCCCAAGGTGAGGTTGAATCGCAATTACAATCAGATCAGCAGGCTAAGAACAACTATACATTCTCAGCTCTTGGAAGACAGTCTTCAATATACTCTCTCACCCTTGATGAATTTCAACACACTTTGTTTGAGGGTGGTAAGAATTTTGGCTCCATGAATATGGATGAGTTCCTCACAAGCATTTGGAATGCTGAGGAAAATCAAGCCATTAACTCATGCCACAATCACAGCACCAGCAGCCACAACAACAATAACAGCAACGGCCTTGTTTCGCTAATTGAATCTTCAGCAGAAAAAGGGATCACAAAGCAACCTAGCCTTCCACGCCAAGGTTCTCTTAAAATTCCTGCTCCACTGTGCAGGAAAACCGTGGATGAAGTTTGGTCTGAGATACATAAAGGACAACAGCAGCAGAGTAGAAACAACAGCAGCAATAATGAAAATGCACAGAATTCTGAGTCTGCTCAGCGACAGCCTACTTTTGGAGAGATGACATTGGAGGATTTCTTAGTAAAAGCTGGGGTTGTGAGGGGACAAGATCCTGCGCCAACGGCAGCTACTCCTCAACAGCGGCATTATGCATTGTATCCAACGACCCCTTCAGTTGGACCATCTTTTAGACCTGCCGTTGGAGTTACTGGTGTTGTGGGTGGGGGAAGCATCGACGGTGGGAGAGGGAATGTGAGCACTGTGTCTGCTCCATACCAATCAGTGTCACAGGCTGGTAGCACAATTGGAGAGGCTGCTGGATATGCTGGAAATGGAAAAAGAGATGGTGGGTATCAGCAGCCGCCGCTGCCACCTGGAGTGTGTTATGGAGGGAGGATGGTGAATGGTGGAGGCGGTTACGTGGTGGCACCACCAACTATAGGAATGCCAGCACCGTTGAGTCCAGTCTCACCAGATAGGATGTGCAGCAATCAGGTTGAGTATGGGATGGATATGAATGCTTTGAGAGGAAGAAAGAGGATTTTAGACGGTCCAGTAGAAAGGGTGGTCGAGAGAAGGCAAAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGATCTAGAGCAAGAAAGCAGGCATACACTGTCGAACTGGAAGCAGAGCTGAACCAGCTAAGAGAAGAGAATGCCCAACTCAAACAGGCACTGGTAATCCACAGCAGTATGATCAATTGA	1191	0.4744	MVVPEPEMVSQGEVESQLQSDQQAKNNYTFSALGRQSSIYSLTLDEFQHTLFEGGKNFGSMNMDEFLTSIWNAEENQAINSCHNHSTSSHNNNNSNGLVSLIESSAEKGITKQPSLPRQGSLKIPAPLCRKTVDEVWSEIHKGQQQQSRNNSSNNENAQNSESAQRQPTFGEMTLEDFLVKAGVVRGQDPAPTAATPQQRHYALYPTTPSVGPSFRPAVGVTGVVGGGSIDGGRGNVSTVSAPYQSVSQAGSTIGEAAGYAGNGKRDGGYQQPPLPPGVCYGGRMVNGGGGYVVAPPTIGMPAPLSPVSPDRMCSNQVEYGMDMNALRGRKRILDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQALVIHSSMIN*	397

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte18g01535	396	Gene3D	-	342	394	-	-
Pte18g01535	396	MobiDBLite	consensus disorder prediction	1	22	-	-
Pte18g01535	396	Coils	Coil	360	394	-	-
Pte18g01535	396	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	34	387	IPR043452	GO:0003700\|GO:0045893
Pte18g01535	396	MobiDBLite	consensus disorder prediction	139	169	-	-
Pte18g01535	396	FunFam	protein ABSCISIC ACID-INSENSITIVE 5 isoform X1	342	393	-	-
Pte18g01535	396	CDD	bZIP_plant_BZIP46	349	385	-	-
Pte18g01535	396	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	342	388	IPR004827	GO:0003700\|GO:0006355
Pte18g01535	396	Pfam	bZIP transcription factor	344	388	IPR004827	GO:0003700\|GO:0006355
Pte18g01535	396	SUPERFAMILY	Leucine zipper domain	344	388	IPR046347	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte18g01535	Pte-Chr18	26937531	26940615	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte18g01535	1	388	bZIP Transcription Factor Family	AT2G36270	48.364	1.37e-101	306

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Pte18g01535		bZIP_1	5.1e-13	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte18g01535	K14432		-	qsa:O6P43_005935	436.417

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte18g01535	18	26937531	26940615	Pte18g01535	18	26937531	26940615	RCT

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