Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01526 ATGGACACATCAAATCCTGCTGTGTTTGTCAATTCTGAGTCGCTACGCCTATATGTTGGAAGGAGAGTTAGGGCACTGATACAGGTTGTGCGATCTGATAATGGAGCTGTGATTGGTAAGTCTACAGATGAGAAGCAGCTAGTTGTCAAGGGATCTCCTCCTCAGCCTCTCACAAAATTTGTTGAAGTTATGGGCATTGCCGATAGCGACAAATCTATCCGCGCAGATGTGTGGACCAACTTTGGTGATGCAATAGATACCTTCAGTTACAATAAACTTTGTCAGCTTGCAAATGGTGAATTTAAGCATCTTTTCTTGTGA 321 0.4299 MDTSNPAVFVNSESLRLYVGRRVRALIQVVRSDNGAVIGKSTDEKQLVVKGSPPQPLTKFVEVMGIADSDKSIRADVWTNFGDAIDTFSYNKLCQLANGEFKHLFL* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01526 106 Gene3D - 1 106 IPR012340 -
Pte18g01526 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Pte18g01526 106 Pfam Replication factor A protein 3 1 102 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pte18g01526 106 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Pte18g01526 106 CDD RPA3 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01526 Pte-Chr18 26902315 26905402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01526 1 107 Core DNA Replication Machinery Family AT4G18590 66.355 7.97e-53 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01526 K10740 - csav:115698878 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01526 18 26902315 26905402 Pte18g01526 18 26902315 26905402 RCT