Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01513 ATGTCCTCTGTCTACAAAAAGAAATCGTCTTTGCTTTACTCCGCTAGAGTCAACCTGCGGTGCAGCACCTGCAGAAAACCAAAGCAGTCTGACATATACAGTCCGAAGCCAATAACCATTAACCTCACAGAAATGAAAAACGAGCACTGCATCAGTCGACGCCTTTCCTCTACTCGCAGACCCTGGGATAAGCAGGATTCTGTCATGACCTGCAGGACCACCACCTCCAGCACCATTGCCGTGTCCCAGTTCGCTAAAGCAGAGGCATACATGAAGGCTACTATGACAATCAGGGCGGGTGGCAGAATACGACGCAAAGTTCATAGTGTGGCTGTGGAGAAAGAATCAGATGACCCATATCTGGATTTTCTGCATTCAATGCTTGAGATGATACTGGAGAATGAAATATACTCGAGGGATGGTCTAGTACAGCTCCTGAGTTGTTTTCTCCAGCTGAATTCGTCGTACCATCACGGGTCTATTGTCAAAGCTTTCACCTCAATCTCCAATGGGGTATACAATCCCGCAACAAATCCATCGCAATCTAACTTCTACCAGGTTGCATTTCAAGTCGATTGA 579 0.4663 MSSVYKKKSSLLYSARVNLRCSTCRKPKQSDIYSPKPITINLTEMKNEHCISRRLSSTRRPWDKQDSVMTCRTTTSSTIAVSQFAKAEAYMKATMTIRAGGRIRRKVHSVAVEKESDDPYLDFLHSMLEMILENEIYSRDGLVQLLSCFLQLNSSYHHGSIVKAFTSISNGVYNPATNPSQSNFYQVAFQVD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01513 192 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 168 IPR038933 GO:0045892
Pte18g01513 192 Pfam Transcriptional repressor, ovate 116 168 IPR006458 -
Pte18g01513 192 ProSiteProfiles OVATE domain profile. 112 171 IPR006458 -
Pte18g01513 192 NCBIfam uncharacterized plant-specific domain TIGR01568 110 168 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01513 Pte-Chr18 26819486 26820064 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte18g01513 Ovate 7.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01513 - - mtr:25499452 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01513 18 26819486 26820064 Pte18g01513 18 26819486 26820064 RCT