Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01501 ATGGCGACGTACTTTCATGGTAGTTCTGAAATCCAAGCAGCTGATGGCCTTCAAACACTTGTACTCATGAATCCCGGCTACATTCAGTACTCTGACACTCCACCACCACCGCATGCCACCAACCATGTGTTCCTCAACTCAGCTTCCACCGAGACCTCACTCACAGCTCAAACCCTCTCCCAGGCGCCCCCAACTCAAATGCAGCAATTTGTCGGAATCCCTATTCAAGCATCTACCACACAAGACCCAAACCACCATCCAGTTCATACTCAACTTGACGTCGTTGCTTTGCATGGATTTGCTCCTCGCATGCGGTACAACCATTGGAATTCAGTTGACGCCAACACTGAGGCGCGTGATACTCCATGCTCTCAGCAAGGACTATCTCTGAGTCTTTCTTCTCAGCGGGCTGGATATGGGTCATTTGGGGTTGACCGTGAAATGGCTTCTCAAGCTCAAGCTCCTGCGATGTCAGGAGATGATGCGCGTATGGTGTCAGTTGCGAGATCTTCATCAGCTTCTGGGGTTACCAACGCTGTTTCTGGTATGCAGGGGGTTCTACTGAGCTCAAAGTATATGAAAGCAGCACAAGAACTGTTGGATGAAGTTGTCAATGTTGATGATGAGAATTTCACTACGAAGACTGAATTGGTCAAGAAGGCTAGTGCGCAGACCAAGGAGAAGGGCGAGTCATCTACGGCTGCGAGTGGAAATGGTTCAACTGGCATGGAGGGGAGCTTCAAGCGTGGCAGTGAGCTATCAACTGCAGAGAGGCAGGAAATTCAGATGAAGAAAGCAAAGTTAATCAACATGCTTGATGAGGTGGAACGGAGGTATAGGCAGTACCATCATCAGATGATGATCGTGATTTCTTCATTTGAACAAGCTGCTGGAATTAGCTCTGCAAGGACATACACTGCCCTTGCACTGCAAACAATTTCAAAGCAGTTTCGTTGCTTAAAGGATGCCATAACTGGCGAAATCAAAGCTTGCACTAAGAATCTAGGTGAAGAAGATTGCCTAGAAGGCAGAATTGAAGGTTCAAGATTGAAATTTGTGGACAATCATCTTAGGCAACAACGAGCTCTTCAACAGTTGGGAATGATTCAGCACAATGCATGGAGACCCCAGAGAGGACTGCCTGAAAGATCCGTGTCTGTTCTTCGTACTTGGCTCTTTGAACACTTCCTTCACCCCTATCCCAAGGATTCAGACAAACATGTACTTGCTAAACAAACAGGGCTTACTAGAAGCCAGGTGTCCAATTGGTTCATCAATGCCCGAGTACGGCTATGGAAACCAATGGTGGAAGAAATGTATTTGGAGGAGATTAAGGAACAGGAAAAGGGAAAGAGTGGATCAGAAGACAAAACAAGCAATGCCCCACAGGACGAAATGTGTGCGAGTGTGAATGACAATCAACCTAGGAGTATCAGTGACAAACGTGACAAATCCACACACCAGAAATCTCCTACAACAGGTCCTGTTCCTAAAGCATCGACGTCAAGATCACCGTTCGTAGTAAACGCTCTTAATCAATCAGGGTTTAGCCTCATTGGCTCTTCTGAGTTAGATGGCATCACTCAGGGAAGTCCCAAGAAACCAAGAAACCTTGAAACGATGCATTCCCCAAATAATCTTGCTCCTGTTAACTTGGACATGAAGTCCAACGAGACAGGTGATGAATCGATGACAATAAAATTTGGTTGTGAAAGGCAGAGTAGAGGTGGCTACTCATTTATGGGAGGACAAACCAACTTCATCGGAGGTTTTGGACAATACCCTATAGGAGAAATCGAAAGGTTTGATGCAGAGCAATTTACACCGAGTTTTTCAGGTAACGGGGTTTCACTCACACTTGGTCTGCCCCACTGTGAAAACCTCTCACTGTCAGGAACTCATCAAACGTTTATTCCCAATCAGAACATTCAACTCGGACGAACGGTGGATATCAGTGAACCAAATGAATTTGGTGCCATAAGCACGTCCACACCATCCTTCATTAGCATATGA 2013 0.4615 MATYFHGSSEIQAADGLQTLVLMNPGYIQYSDTPPPPHATNHVFLNSASTETSLTAQTLSQAPPTQMQQFVGIPIQASTTQDPNHHPVHTQLDVVALHGFAPRMRYNHWNSVDANTEARDTPCSQQGLSLSLSSQRAGYGSFGVDREMASQAQAPAMSGDDARMVSVARSSSASGVTNAVSGMQGVLLSSKYMKAAQELLDEVVNVDDENFTTKTELVKKASAQTKEKGESSTAASGNGSTGMEGSFKRGSELSTAERQEIQMKKAKLINMLDEVERRYRQYHHQMMIVISSFEQAAGISSARTYTALALQTISKQFRCLKDAITGEIKACTKNLGEEDCLEGRIEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRTWLFEHFLHPYPKDSDKHVLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEKGKSGSEDKTSNAPQDEMCASVNDNQPRSISDKRDKSTHQKSPTTGPVPKASTSRSPFVVNALNQSGFSLIGSSELDGITQGSPKKPRNLETMHSPNNLAPVNLDMKSNETGDESMTIKFGCERQSRGGYSFMGGQTNFIGGFGQYPIGEIERFDAEQFTPSFSGNGVSLTLGLPHCENLSLSGTHQTFIPNQNIQLGRTVDISEPNEFGAISTSTPSFISI* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01501 670 CDD homeodomain 374 435 IPR001356 GO:0003677
Pte18g01501 670 MobiDBLite consensus disorder prediction 522 552 - -
Pte18g01501 670 Pfam Associated with HOX 186 325 IPR006563 -
Pte18g01501 670 FunFam BEL1-like homeodomain protein 9 377 439 - -
Pte18g01501 670 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Pte18g01501 670 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Pte18g01501 670 MobiDBLite consensus disorder prediction 219 256 - -
Pte18g01501 670 Gene3D - 377 439 - -
Pte18g01501 670 Coils Coil 258 285 - -
Pte18g01501 670 MobiDBLite consensus disorder prediction 456 475 - -
Pte18g01501 670 SMART HOX_1 374 438 IPR001356 GO:0003677
Pte18g01501 670 SUPERFAMILY Homeodomain-like 375 440 IPR009057 -
Pte18g01501 670 MobiDBLite consensus disorder prediction 445 503 - -
Pte18g01501 670 MobiDBLite consensus disorder prediction 489 503 - -
Pte18g01501 670 MobiDBLite consensus disorder prediction 227 248 - -
Pte18g01501 670 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 459 - -
Pte18g01501 670 SMART prehox3 181 326 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01501 Pte-Chr18 26702990 26707205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01501 1 658 Homeobox Transcription Factor Family AT2G35940 49.300 6.79e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte18g01501 POX 1.7e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01501 - - qsa:O6P43_009674 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01501 18 26702990 26707205 Pte18g01501 18 26702990 26707205 RCT