Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01498 ATGGAGATGGAACAACTGCTTAACATGGGGTTCCCTCAAGACATAGCCGCTCAAGCATTGGCTGCCACCGGTGGCAAATCCATCTACAAAGCCACTGAATGGATTCTCACCCACGAGTCCTCTCCTACCTTTTCTTCTTCTTCACCGGGCCCCACTTCTACCTTTGGCACAGAAAACACCACTAGCAACACCTCCTCTCCCTTTCAACCTAAACTAGATCGCTTCTTCCATTTACAAGCGAAGCCCTCTTCTTCTCTCACACCCACTACTGCTCATCACCCACAGCAGAAGAATCATCTTCAAAACGAAGAAAAAAAGCAAGACGTCGCAGAGGATACAACGCCTACTTCAAAGCGTGTGAAGCTGTTAAATTCATCAAGTTTCTGTCAACAAAGAGGGGAAAACAATACCCCATTGTTATTTGGTGATGTCTATCAAGCAAAGGCTGCTGCTGAGAAGGTCAAGAAACATCCCCATCAGCCTTTATATGAGCGTATGCGTCCTAGAACTGTAAATGAGGTTTTGGGTCAGGACCATATTCTGGGTAATAATTCTCTGCTTCGTTGTGCTATTGAACGCAATCAATTACCTTCTATTATTTTCTGGGGCCCTCCTGGTACAGGTAAGACATCCATTGCTAAGGCCCTTGTGAACTCTGCTGCACCACAAAAACAACAAAAGTGTTCTTTCTATAGATTTGTTTCCTTGTCTGCAGTAACTTCTGGAGTTAAGGATGTAAGGGATGTTGTTGAGGAAGCTAGGAAGTTAAGGTCTAAGAATGACCAGAGGACTTTGTTGTTTGTAGATGAGGTTCATAGGTTTAATAAATCTCAGCAAGATTCTTTTTTGCCTGTTATTGAGGATGGAAGTATTGTATTCATTGGTGCCACTACCGAGAATCCTTCTTTCCACTTGATTACTCCATTATTGTCTCGGTGCCGCGTGCTTGCTCTTAATCCTCTTAAACCCGAACATGTTACCTTGCTTCTAAAGCGGGCTGTGGATGATTGGGAAAAAGGATTGGCACGGAGTGTTGGTTGTCATGTTGATGTCATTGAAGAAGCCATTGACTTTATAGCGCACAATTGTGATGGTGATGTCCGTGTGGCATTGAATGCTCTGGAGATTGGTGCTACCACAGCAGCTGGTCGTGTACCTAAAGGTAGTCACTCTCAAGATGCAGCAGAAAAGAAGGATCTAGATGTGAATTCTCTGAAAAATGAGGGAAATGGATTGAGTTCATGTTCTGTCGTGATTACACTTGATGATGCTAAAGAGGCACTTCAGTGCAAGCATCTTGTGTATGACAAAGCAGGGGAAGAGCACTATAATCTGATTAGTGCTTTGCACAAGTCTATGAGGGGAAGTGATGCTAATGCTGCAATTTATTGGTTAGCAAGAATGTTGGAAGCAGGTGAGCAGCCGCTCTACATTGCAAGGAGACTCATAAGGTTTGCGAGTGAGGATGTTGGGTTAGCTGATCCATCTGCACTCAACCAGGCTGTTTCTTGCTACCAAGCTTGCCACTTTTTGGGCATGCCAGAGTGCAACGTCATTCTTGCACAATGTGTGGCTTACTTAGCCTTAGCTCCAAAATCTGTTTCTGTTTATCGTGCTATAGAAGCTGCTCAAAAGGTGGTAAAGGAATCTATTGGGCAAAATGAGGGAGTGCCTCTTCATCTGAGGAATGCTCCAACCAAACTAATGAAGACACTTGGGTATGGGAAGGAATATTTATACCCACCTGACAATCCCTTCTCTACACAGAGCTATCTGCCGCCTTCACTTCAAGGTTATACCTTCCTGAACTGGCCAGAGCAGAATTTGCAATTATGA 1836 0.4412 MEMEQLLNMGFPQDIAAQALAATGGKSIYKATEWILTHESSPTFSSSSPGPTSTFGTENTTSNTSSPFQPKLDRFFHLQAKPSSSLTPTTAHHPQQKNHLQNEEKKQDVAEDTTPTSKRVKLLNSSSFCQQRGENNTPLLFGDVYQAKAAAEKVKKHPHQPLYERMRPRTVNEVLGQDHILGNNSLLRCAIERNQLPSIIFWGPPGTGKTSIAKALVNSAAPQKQQKCSFYRFVSLSAVTSGVKDVRDVVEEARKLRSKNDQRTLLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTENPSFHLITPLLSRCRVLALNPLKPEHVTLLLKRAVDDWEKGLARSVGCHVDVIEEAIDFIAHNCDGDVRVALNALEIGATTAAGRVPKGSHSQDAAEKKDLDVNSLKNEGNGLSSCSVVITLDDAKEALQCKHLVYDKAGEEHYNLISALHKSMRGSDANAAIYWLARMLEAGEQPLYIARRLIRFASEDVGLADPSALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSVSVYRAIEAAQKVVKESIGQNEGVPLHLRNAPTKLMKTLGYGKEYLYPPDNPFSTQSYLPPSLQGYTFLNWPEQNLQL* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01498 611 CDD HLD_clamp_RarA 321 429 - -
Pte18g01498 611 Gene3D - 533 610 - -
Pte18g01498 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 393 IPR027417 -
Pte18g01498 611 Gene3D - 2 54 - -
Pte18g01498 611 FunFam Replication-associated recombination protein A 152 320 - -
Pte18g01498 611 SUPERFAMILY post-AAA+ oligomerization domain-like 439 608 IPR008921 GO:0003677|GO:0006260
Pte18g01498 611 SMART AAA_5 195 321 IPR003593 GO:0016887
Pte18g01498 611 MobiDBLite consensus disorder prediction 97 115 - -
Pte18g01498 611 MobiDBLite consensus disorder prediction 83 117 - -
Pte18g01498 611 SUPERFAMILY UBA-like 3 50 IPR009060 GO:0005515
Pte18g01498 611 Gene3D - 321 393 - -
Pte18g01498 611 Gene3D - 148 319 IPR027417 -
Pte18g01498 611 CDD AAA 176 314 - -
Pte18g01498 611 MobiDBLite consensus disorder prediction 40 70 - -
Pte18g01498 611 Pfam MgsA AAA+ ATPase C terminal 455 604 IPR021886 -
Pte18g01498 611 Pfam UBA/TS-N domain 4 35 IPR015940 -
Pte18g01498 611 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Pte18g01498 611 Gene3D - 429 532 - -
Pte18g01498 611 Pfam AAA C-terminal domain 348 454 IPR032423 -
Pte18g01498 611 Pfam ATPase family associated with various cellular activities (AAA) 199 315 IPR003959 GO:0005524|GO:0016887
Pte18g01498 611 FunFam AAA-type ATPase family protein 321 395 - -
Pte18g01498 611 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 1 608 - -
Pte18g01498 611 FunFam Putative AAA family ATPase 429 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01498 Pte-Chr18 26617820 26619655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01498 161 375 Core DNA Replication Machinery Family AT1G77470 26.697 1.55e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01498 K07478 - qsu:112015639 779.63